Pseudomonas cannabina pv. alisalensis: JGS08_05395
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Entry
JGS08_05395 CDS
T07379
Symbol
rutD
Name
(GenBank) pyrimidine utilization protein D
KO
K09023
aminoacrylate hydrolase [EC:3.5.1.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00240
Pyrimidine metabolism
pcab01100
Metabolic pathways
Module
pcab_M00939
Pyrimidine degradation, uracil => 3-hydroxypropanoate
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JGS08_05395 (rutD)
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Motif
Pfam:
Abhydrolase_1
Abhydrolase_6
Hydrolase_4
Abhydrolase_4
FSH1
Motif
Other DBs
NCBI-ProteinID:
QQN23105
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All DBs
Position
complement(1196798..1197577)
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AA seq
259 aa
AA seq
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MFHEIHRCQHADAPLLVLSSGLGGSSRYWADDLAVLTRDHDVLVYDHAGTGRSPAVLPPD
YSIRHMAVELLTLLDALGIQRCDFMGHALGGLVGLELALLRPDLLQRQVLINAWSSPNPH
SARCFSIRKHLLLNSGPQAYVHAQALFLYPADWIAANSARLADDEAHALAHFPDTDNLLR
RINALESFDIEAQLSQIDTPTLLIANRDDMLVPWQQSLHLAETLPNARLELLDYGGHASS
ISDPPPFRRAVLDFLDARS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgaaatccatcgctgtcagcatgccgatgcgccgctgctggtgctcagttcc
gggctgggcgggtccagccgttactgggccgatgacctggccgtgctcacccgcgaccat
gacgtactggtctacgatcacgcagggaccgggcgcagccctgcagtgctgccgccggat
tactcgatccggcacatggccgtcgaactgctgaccctgctcgacgcgctaggcatccag
cgttgtgatttcatgggccatgcgctgggcgggctggtcggcctggagctggcgctgctg
cgtcctgacttgctgcaacgccaagtcctgatcaacgcctggagcagcccgaacccgcac
agcgcgcgctgtttttccattcgcaagcacctgctgttgaacagcgggccgcaggcttat
gtgcacgcacaggcgctgtttctttatcctgctgactggatcgccgccaacagcgcccgc
ctggccgatgatgaagcccatgcgctggcgcatttcccggacaccgacaacctcctgcgg
cgtatcaatgcgctggagagcttcgacatcgaagcgcaactgagccagatcgacacaccg
acgctgttgattgccaaccgcgatgacatgctggtgccctggcagcaatcgctgcatctg
gccgaaacgttgccgaatgccaggctggaattgctggactacggcggccatgcctccagc
atcagcgacccgccgccgtttcgacgcgcggtgctcgattttctcgacgctcgctcctga
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