KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_05415
Entry
JGS08_05415       CDS       T07379                                 
Symbol
rutR
Name
(GenBank) pyrimidine utilization regulatory protein R
  KO
K09017  TetR/AcrR family transcriptional regulator
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcab03000]
    JGS08_05415 (rutR)
Transcription factors [BR:pcab03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    JGS08_05415 (rutR)
SSDB
Motif
Pfam: TetR_C_3 TetR_N TetR_C_29 SecIII_SopE_N
Other DBs
NCBI-ProteinID: QQN24607
LinkDB
Position
1200098..1200826
AA seq 242 aa
MCVNKKPPAAEPASKRVRKVKPETVAKTTREPSADSLKRRMRLMEGKRTLILDAALEIFS
RYGVHGSSLDQVASLADVSKTNLLYYFSSKDDLYLNVLRQLLEVWLSPLVHFTADKEPVQ
AIGAYLKAKLEMSRDHPAESRLFCMEVMQGAPLIHGELQHPLRDTVEAKVAVIQHWIDSG
QLAPINPHHLIFSLWATTQHYADFRTQVEAVTGKTLDDPAFFEEVLASLRSMILDGILPR
NG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtgcgtgaataagaaacctcctgcggctgagcctgcgagcaagcgtgtacgcaaggtc
aagccggaaaccgtggccaagaccacccgcgagcccagcgccgactcgttgaagcgacgc
atgcgtctgatggaaggcaagcgcacattgattctcgatgcggcgctggagatattttcc
cgctacggcgtgcatggcagcagcctggatcaggtggcgagcctggctgacgtttccaag
accaacctgctgtattacttcagcagcaaggacgatctgtacctgaatgtgctgcgtcaa
ctgcttgaagtctggctcagcccgctggtgcatttcaccgccgacaaagagccggtgcag
gccatcggcgcgtacctcaaggccaaactggaaatgtcccgcgaccatccggccgagtcg
cgcctgttctgtatggaagtgatgcaaggcgcgccgttgattcatggcgagttgcagcat
ccgttgcgcgataccgtggaagccaaggtggccgtgatccagcactggatcgacagcggc
cagttggcgccgatcaacccgcaccatctgattttctcgctgtgggcgaccacccagcat
tacgcggacttccgcacccaggtcgaggccgtcaccggcaagacactggacgacccggcg
tttttcgaagaagtgctggccagcctgcgcagcatgattctggacggcatcctgccgcgt
aatggctga

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