Pseudomonas cannabina pv. alisalensis: JGS08_06080
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Entry
JGS08_06080 CDS
T07379
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00270
Cysteine and methionine metabolism
pcab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JGS08_06080 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_06080 (dcm)
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_06080 (dcm)
03036 Chromosome and associated proteins [BR:
pcab03036
]
JGS08_06080 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pcab02048
]
JGS08_06080 (dcm)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
JGS08_06080 (dcm)
Transcription factors [BR:
pcab03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
JGS08_06080 (dcm)
DNA replication proteins [BR:
pcab03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
JGS08_06080 (dcm)
Chromosome and associated proteins [BR:
pcab03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
JGS08_06080 (dcm)
Prokaryotic defense system [BR:
pcab02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
JGS08_06080 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNA_meth_N
Motif
Other DBs
NCBI-ProteinID:
QQN24615
LinkDB
All DBs
Position
1341489..1342874
Genome browser
AA seq
461 aa
AA seq
DB search
MSQPVSFSDPHPIQDMDLLRRLLEIYDQRQLAAKLKEIGSPHCRETVNRWVKGKSTPRLT
HNEHRYLESLLPTPPAYKPSFTFIDLFAGIGGIRKGFEAIGGECVFTSEWNTYAVRTYKA
NHYCDPKRHKFNQDIRTVTLSDKPEISDEEAYQNINREIPDHDVLLAGFPCQPFSLAGVS
KKNSLGRKHGFECETQGTLFFDVARIIAAKRPSAFLLENVKNLKSHDKGNTFRIICEALD
ELGYEVADVNAPKGADPKVIDAKHFVPQHRERIVLVGFRRDLNVHGGFTLRDIEKLIPKQ
RPSFGDLLDKEVDSKYILTPNLWDYLYRYAEKHRQKGNGFGFGLTRPNDIARTLSARYHK
DGSEILVDRGFVEHLDFNSELNQINRPRRLTPHECSRLMGFDKPGESKFVIPVSDTQAYR
QFGNSVAVPVFEAVAKLMKSRILAAKEKTADAPQLEFSLPA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcctgtctccttttctgatccgcatccaattcaagacatggatctgctacgc
aggcttcttgagatttatgatcaacggcagcttgcagcaaagctgaaagagattggatcg
ccacattgccgtgaaactgtgaatcgctgggtcaaagggaagtcgacgcctcgccttacg
cacaatgagcacaggtatcttgagtcattgcttccaactcctccggcgtacaagccttca
tttacgtttatagatctgttcgctggtataggtggtattcgtaagggattcgaggcgatt
ggaggtgagtgcgtcttcacttctgagtggaatacctatgctgtcagaacctataaggca
aaccattactgcgatccgaagcgtcataaattcaatcaggatatccgtaccgtaaccctt
tcggacaaaccagaaattagtgacgaagaagcgtatcagaatattaatcgcgagattcct
gatcacgatgtacttcttgccgggtttccatgccagccattttctctggcaggcgtatcc
aaaaagaattcgctcggtcgcaagcatggatttgaatgtgaaactcaagggacgcttttc
tttgacgtagctcggatcattgccgcaaaacggccatctgcgtttcttcttgaaaacgtc
aagaatctcaaaagccatgataagggcaatacgttccgaatcatctgtgaagcactggat
gaactcggatacgaggttgccgacgtaaacgctccaaagggggctgatcctaaggtgatc
gatgcaaagcatttcgttccacagcatcgcgagcgaatcgtgttggtcggatttcgacgg
gatttgaacgtgcatggaggcttcacgcttcgtgacattgaaaagcttataccgaagcag
cgtcccagctttggagacctcctggacaaggaagtagatagcaaatacatccttactccg
aatctttgggactacctctaccggtacgcagaaaagcaccgtcagaaaggcaacggcttc
ggttttgggcttacccgccccaacgacatcgcgcgcacgctatctgctcgataccacaag
gacggatctgaaatattggtagaccgaggttttgtagagcaccttgatttcaacagtgag
ctaaatcagattaatcgtccgcgtaggctaacccctcacgagtgctcgaggctgatgggg
tttgacaagcctggcgagagtaaatttgttatcccggtttctgatactcaagcttatagg
caattcggtaactcggttgcggttccagtttttgaggcggtagccaagctgatgaaaagc
aggattctggccgcgaaagagaaaactgccgatgctcctcagttggaattttcattgcct
gcttaa
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