Pseudomonas cannabina pv. alisalensis: JGS08_06180
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Entry
JGS08_06180 CDS
T07379
Name
(GenBank) IS256 family transposase
KO
K07493
putative transposase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JGS08_06180
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GFIT
Motif
Pfam:
Transposase_mut
MULE
BRR2_plug
DUF6264
Clr5
Motif
Other DBs
NCBI-ProteinID:
QQN23244
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Position
complement(1366254..1367513)
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AA seq
419 aa
AA seq
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MPTKKKSASAAARELPSIPQELIEQFVTGPMSAEAIQDASMAFKKALIERALGAELGHHL
GYPQGAERPEESTNQRNGKSSKTVLTDDGPLRLDIPRDRDGSFAPILIPKHERRFTGFDD
KIIALYARGMTVREIRAFLSEQYGTDVSHDFISSVTDAVMEEVGAWQQRPLEPMYPVIFF
DALRVKIRDEGLVCNKAIYLALGVLPDGTRDILGIWIESTEGAKFWMKVFNDLKTRGVED
VLIAVTDGLKGIPEALGAIFPATTLQTCIVHLIRNSLDYAAWDKRRALAKALKPIYQAIN
ADVAEQELNAFEAGPWGKQYPTVVAAWRRAWDRVIPFFVFPAGIRKVVYTTNAIESINAQ
LRKIIKTRGHFPTDDAATKLIWLALRNITANWGHPAHDWKVAMNQFAILYGDRFTRPSW
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccaaaaagaagtccgccagtgcagcagcgagggaattaccctcgattccccaa
gaactgatcgagcagtttgtcacaggcccgatgagtgccgaggccattcaagacgcttcc
atggcgttcaagaaggcgctgatcgagcgtgcgctaggtgcagaactcggtcaccacctt
ggctatcctcagggcgcggagcgccctgaggagtcgactaatcagcgcaatggcaaaagc
agcaagacggttctgaccgacgacgggccgcttcgcctggatatccccagagaccgcgat
ggtagcttcgccccgatcctgattcccaagcacgaacgccgttttacaggcttcgacgac
aagataattgccttgtacgcccggggcatgacggtgcgtgagatccgtgcttttttgtct
gagcagtatggaactgacgtgtcccatgacttcatcagctcagtcaccgatgcggtcatg
gaagaggtgggcgcttggcagcaacgccccttggaaccgatgtatccggtgatcttcttc
gatgcgttacgggtcaaaatccgggacgaggggttagtgtgcaacaaggctatttatctg
gcgctgggggtattacctgatggcacgcgcgacattctgggtatatggatcgagagcacc
gagggtgccaagttttggatgaaggtgttcaacgacctcaagactcgtggcgttgaagat
gttctgatcgccgttacggatggtctcaaagggataccggaggctttgggagcgattttt
cctgccacgacgctgcaaacctgcatcgtgcacctgatccgcaacagcttggattatgcg
gcttgggataaacgtcgagcattggccaaggcgctcaaaccgatttaccaggcaatcaat
gccgatgttgccgagcaagagctgaacgcctttgaagccgggccctggggaaagcagtat
ccaaccgtggttgcggcttggcgtcgtgcctgggatcgggttatcccgttttttgtcttc
ccggcaggtatacgtaaggtggtctacacgactaacgccatcgaaagcatcaacgctcag
ttacgaaagatcattaaaacccgaggacacttcccgaccgacgatgcggcgacgaagctg
atctggctggcactacgcaatatcacagctaactgggggcacccagcgcatgattggaaa
gtggcaatgaatcaatttgcgattctctacggagaccgatttaccagaccgagctggtaa
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