Pseudomonas cannabina pv. alisalensis: JGS08_06220
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Entry
JGS08_06220 CDS
T07379
Symbol
ttcA
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_06220 (ttcA)
Transfer RNA biogenesis [BR:
pcab03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
JGS08_06220 (ttcA)
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Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
DacZ_P
Motif
Other DBs
NCBI-ProteinID:
QQN23252
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Position
1374769..1375593
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AA seq
274 aa
AA seq
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MGTLSVNQNKLQKRLRRLAGEAVADFNMIEDGDKVMVCLSGGKDSYTLLDVLLHLQKVAP
IRFDIVAVNMDQKQPGFPEHVLPAYLKALGVEYHIVEKDTYSVVKELIPEGKTTCSLCSR
LRRGTLYTFADEIGATKMALGHHRDDIVETFFLNMFFNGSLKAMPPKLRADDGRNVVIRP
LAYCHEKDIQAYSGLKQFPIIPCNLCGSQENLQRQVVKDMLLDWERKTPGRTESIFRALQ
NVQPSQLADRKLFDFSNLRIDETAASRFVNVVNI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccctttcagtcaatcagaacaaactgcagaaacgtctgcgtcgactggccggc
gaagcggtggccgacttcaacatgatcgaagacggcgacaaggtgatggtctgcctgtcc
ggtggcaaagacagttacaccctgctcgacgtgttgctgcacttgcagaaagtcgcgccg
atcaggttcgacatcgtggcggtcaacatggaccagaagcagccgggctttcccgagcat
gtgctgccggcctatctgaaagcgctgggggtcgagtaccacatcgtcgagaaggacacc
tactcggtggtcaaagagctgatccccgaaggcaagactacgtgctcgctgtgttcgcgc
ctgcgtcgcggcacgctgtacaccttcgccgacgaaatcggtgccaccaagatggcgttg
gggcatcaccgtgatgacatcgtcgagacgttcttcctgaacatgttcttcaacggctcg
ttgaaagccatgccgcccaagctgcgtgccgatgacggtcgcaatgtggtgattcgtccg
ttggcctactgccacgagaaagacattcaggcctattcgggcctcaagcagtttccgatc
attccttgcaatctctgcggctcgcaggaaaatctgcaacgccaggtggtcaaggacatg
ctgctggactgggagcgcaagacgccaggccgcaccgaaagcatcttccgcgcgctgcag
aatgttcagccttcgcaactggccgatcgcaagctgttcgacttcagtaacctgcgcatc
gacgaaaccgcggcgtcacggttcgtcaatgtggtgaatatctga
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