Pseudomonas cannabina pv. alisalensis: JGS08_06545
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Entry
JGS08_06545 CDS
T07379
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
JGS08_06545 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pcab03011
]
JGS08_06545 (rpsA)
Ribosome [BR:
pcab03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
JGS08_06545 (rpsA)
Bacteria
JGS08_06545 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QQN23310
LinkDB
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Position
1446435..1448126
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AA seq
563 aa
AA seq
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MSESFAELFEESLKTLNLQAGSIITAIIVDIDYQAGWVTVHAGLKSEGLIPLEQFHNDAG
ELTIKIGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVTVNDKGAIVRGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGEEIEAKIISVDRKSRVISLSIKSKDVEDEKEAIQSLRSKP
EVAESTGPTTIGDLLRAQMEKQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcagaactttttgaagaaagcctaaagaccctcaaccttcaggcc
ggttcgatcatcaccgcgatcatcgtggatatcgactaccaggcaggttgggttacggtt
cacgccggtctgaaatctgaaggcctcatcccgctggaacagtttcacaacgacgctggc
gagctgaccatcaagatcggtgatgaagttcacgttgcgctggacgcggtcgaagatggc
tttggcgaaaccaagctgtcccgcgaaaaagccaagcgtgccgagtgctggatcgttctg
gaagcggctttcgcagctgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgcctggttctctggttgacgtc
cgccctgtgcgtgacacgactcacctggaaggcaaagagcttgagttcaaggtcatcaag
ctggaccagaagcgcaacaacgttgtcgtttcccgtcgcagtgtcctggaagccgagaac
agtgccgagcgcgaagctctgctcgagtccctgcaggaaggtcagcaagtcaaaggtatc
gttaagaacctcaccgattacggcgcgttcgtcgatctgggtggcgtcgatggcctgctg
cacatcaccgacatggcctggaagcgtatcaagcatccatcggaaatcgtcaacgttggc
gatgagatcgatgtaaaggttctgaagtacgatcgcgagcgcaatcgtgtttccctgggt
ctgaagcaactgggtgaagacccatgggttgctatcaaggctcgttacccggaaagcacc
cgcgttaccgcgcgtgttaccaacctgaccgactacggctgtttcgcagagctggaagag
ggcgtggaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccacccg
tcgaaagtcgttcaggttggcgacgaagtggaagtcatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaaacagtgcaaatccaacccatgggaagatttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggatggcggcatcgacggtctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgtacgtcgcttcaagaagggcgacgagctcgacactgtg
atcctgtcggttgatcctgagcgtgagcgcatctcgctgggtatcaagcagctggaaagc
gatccgttctccgagtacgtcactgtcaatgacaagggcgctatcgttcgcggtatcgtt
aaagaagttgacgccaaaggcgccatcatcaccttggccgacgacatcgaagcgaccctc
aaggcttccgaaatcagccgtgaccgcgttgaagacgcgcgtaacgttctgaaggaaggc
gaagagatcgaagccaagatcatcagcgttgaccgcaagagccgcgtaatcagcttgtcc
atcaagtcgaaagacgttgaagacgagaaagaagcaatccagagcctgcgtagcaagcct
gaagttgctgaaagcactggtcctaccaccattggtgacctgctgcgcgcgcagatggaa
aaacagaactaa
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