Pseudomonas cannabina pv. alisalensis: JGS08_06735
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Entry
JGS08_06735 CDS
T07379
Name
(GenBank) response regulator
KO
K20973
two-component system, sensor histidine kinase SagS [EC:
2.7.13.3
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
pcab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_06735
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JGS08_06735
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcab01001
]
JGS08_06735
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcab02022
]
JGS08_06735
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JGS08_06735
Protein kinases [BR:
pcab01001
]
Histidine kinases
Other
JGS08_06735
Two-component system [BR:
pcab02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
JGS08_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
PDE8A_N
HATPase_c_2
IFT57
DUF2514
DUF4164
Motif
Other DBs
NCBI-ProteinID:
QQN23341
LinkDB
All DBs
Position
complement(1484348..1486699)
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AA seq
783 aa
AA seq
DB search
MDISLKKRLSFKQARLAVLIGFALGTLLSFAQIALDYASEDASINREIKSLLEITQNPAS
RIAYNIDAELAQELTLGLLHSPAVVSARLTDNNDTVLASVERPMATGRYRMFSDWLFGES
RQFQEKLHLDHLPDETIGTLYLTVDTFAFGSHFLQRAEITLLNGFVRSLALAGILTILFY
ATLTKPLVRVIRELSSRDPRSPDQARINCPPHHEQDEIGVLVATFNRQIETMSAEFSRRR
AAEDRLTDHLNQLENIVSARTNELKASNMRLRQSNEELQIARSTALDMAHARSAFLAHMS
HEIRTPLNGLLGMLALSLDSPLGAEQRQQLMIAHDSGKVLVELLNDILDMSKFDAGHLEI
ERIPFDLGALIEDTANLLSQNAAPSVELTCLIAPDFPALVTGDPTRVRQIVSNLLSNALK
FTRFGRVDVRLTHHLDSTSGENRVRIEVRDTGIGIAQDAQAKIFQPFTQAEAAITRQYGG
TGLGLALTNNLCEAMNGQLSIQSQSGFGSQFCAELPLPINLPAVAQTPLKGRVTVISSAG
SGLVELLGNLLPFWGVDLKRRSIDDRPDDLDLDSGPDLVITDCPECLFAIRPTTPVPILL
VTAYGNFMPAEQVAALAPLQQQARPLARNALYHTLRRVLNQEEPGSRDPMALEHTTQHQA
RVLLVEDNPVNQLVAKGILGKLGCEVVISSHGGEALEQLEHSHFDLVLMDCNMPVMDGYE
ASRQIRSSGRWPNLPIVALTANAMPDERERCKAAGMNDYLAKPFRRAELVSILDQWIPLT
EER
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcgctcaaaaaaaggctttcgttcaaacaggcgcgccttgccgtgttgatc
ggcttcgcgcttgggaccttgctgagctttgcgcagattgcgcttgattatgccagcgaa
gacgcctccatcaatcgcgaaatcaaatccctgctggaaatcacccagaatcctgcctcg
cgcatcgcctataacatcgacgccgagctggctcaggaactgaccctcgggctgctgcac
tcccctgccgtggtcagtgcgaggctgactgacaacaatgacacggtgctcgccagtgtt
gaacgaccgatggccaccggccgttatcggatgttcagtgactggctgttcggggaaagc
cgacagtttcaggaaaagctgcaccttgaccatctgccggacgaaaccatcggcacactg
tacctgaccgtcgacaccttcgcgttcggcagccacttcctgcaacgcgcggaaataacg
ctgctcaacggcttcgtgcgcagcctggcgctggcgggaattctgaccattctgttctac
gcgacgctcaccaaaccgctggtccgggtgatcagggaactgagcagccgcgatccgcgc
agcccggatcaggccaggatcaactgcccgccacaccatgaacaggatgaaatcggtgtg
ctggtcgccacgttcaatcgtcagatcgagaccatgagcgccgagttttccaggcggcgc
gcggccgaagaccgcctgaccgatcacctgaatcagctggaaaacatcgtctcggcacgc
accaatgaactcaaggccagcaacatgcgcctgcgccagtccaacgaagaactgcagatc
gcgcgcagtaccgcgctggacatggctcacgcgcgctcggcatttctggcgcacatgagc
catgaaatccgcaccccgctcaacggcctgctgggcatgctggccctgtcgctggacagc
ccgctcggggccgagcaacgccagcaactgatgatcgcccatgattcgggcaaagtgctg
gtggaactgctcaacgatattctcgacatgtccaagttcgacgctggccatctggagatc
gaacgcatcccgttcgacctcggcgcgctgatcgaggacaccgccaacctgttgtcgcag
aacgccgcgccgagtgtggagctgacctgcctgatcgcgccggacttcccggcgctggtc
accggcgacccgacccgggtccggcagatcgtcagcaacctgctgtccaacgcgctcaag
ttcacccgcttcggccgggtggacgtgcgcctgacacaccatctggattccaccagcggg
gaaaaccgggtgcgcatcgaagtgcgtgacaccggaatcggcatcgcgcaggacgctcag
gcaaaaatattccagcccttcacccaggcggaagcagccatcacccgccagtacggcggc
accgggctggggctggcgctgaccaacaacctgtgtgaagccatgaacggccagttgagc
attcagtcgcagtccggttttggcagccagttctgcgccgagctgcccttgccgatcaac
ctgcctgcggtcgcccagacgccgctcaagggccgggtgacggtgatcagttcagcgggc
agcggtctggtggaactgctcggcaacctgcttcccttctggggcgtggacctcaaacga
cgcagcatcgacgaccgtccggacgatctggaccttgacagcggcccggacctggtgatt
accgactgccccgagtgcctgttcgcgatccggccgaccacgcccgtgccgattctcctg
gtcaccgcttacggcaatttcatgcccgccgagcaggtcgccgccctcgcaccgctgcag
cagcaagcccggccgctggcgcgtaacgcgctctaccacaccttgcgacgggttctgaat
caggaagagccaggctcacgcgacccgatggcccttgaacacacgacgcaacatcaggcg
cgcgtgctgctggtggaggataatccggtcaatcaactggtggccaagggcattctcggc
aaactcggctgtgaagtggtgatcagcagccatggtggcgaggcgctggagcaactggaa
cacagccacttcgatctggtgctgatggactgcaacatgccggtcatggacggttacgag
gccagtcggcagatccgcagcagcggtcgctggccgaacctgccgattgtcgccctgacc
gccaacgccatgcccgacgaacgcgagcgctgcaaggcagcgggtatgaacgattatctg
gccaagccgttcaggcgtgccgaactggtcagtattctcgatcagtggattccgctcacc
gaggagcgctga
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