Pseudomonas cannabina pv. alisalensis: JGS08_06900
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Entry
JGS08_06900 CDS
T07379
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_06900 (rluB)
Enzymes [BR:
pcab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
JGS08_06900 (rluB)
Ribosome biogenesis [BR:
pcab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JGS08_06900 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QQN23366
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Position
1513215..1514441
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AA seq
408 aa
AA seq
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MSEKDKQDSQEIGPAGEKLQKVLARIGVGSRRDVEAWITQGRIKVNGKDATLGQRVDLHD
AISVDGRVIKREEAAETVRRVIMYNKPDGEICTRDDPEGRPTVFDRLPRPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSFEMDREYAVRVRGEVDDDMLLRLKNGVILEDGPAR
FTDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRYGPVFLNSDLPMG
RWREMSQYEVDILSAEVGLQPVAQPQMNAKTKDKMERLQRQSSRPLGKGERVVRTLRPAA
GAPTGERAPRQPQITGSERDRPRGGDSTQRPSPRKDSGKPGSRAPRPADNSRGTPVAERP
SDMNKRPAKPGPKRVGIKLVNDDAPSGKRRGPPAGSGQRPGFGRRKPE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaagacaagcaggacagccaggaaatcggacccgcaggcgaaaagctgcag
aaggttctggcgcgtattggcgtgggttcacgccgtgacgtagaagcctggattacccaa
ggccgtatcaaggtcaacggcaaggacgcgaccctcggtcaacgcgtcgacctgcatgac
gccatcagtgtcgatggtcgcgtcatcaagcgcgaagaagcggctgaaacagtccgtcgc
gtcatcatgtacaacaagcccgatggcgaaatctgcacccgtgacgacccggaaggccgt
ccgaccgtgttcgaccgtctgccgcgccctaaagaaggtcgctggatcaacatcggtcgt
ctcgacatcaacaccaccggtctgctgatgttcaccaccgacggtgaactcgccaaccgc
ttgatgcacccgtcgttcgagatggaccgtgaatatgcggttcgtgtgcgtggcgaagtc
gatgacgacatgctgctgcgcctcaagaacggcgtgatcctcgaagacggtcctgcacgc
ttcaccgatatcaagcaggcgccgggcggcgaaggtttcaaccactggtatcactgcgtg
gtgatggaaggccgtaaccgcgaagtgcgtcgtctctgggaatctcaggggctggtggtc
agccgcctgaagcgcgtgcgctacgggccggtgttcctcaattccgatctgccgatgggt
cgctggcgtgaaatgagccagtacgaagtcgatattctgtctgccgaagtcggtctgcaa
cctgtggctcagccgcagatgaatgccaagaccaaggacaagatggagcgtctgcaacgt
caatcgtcgcggccgctgggcaagggcgagcgcgttgtgcgtaccctgcgtcctgctgcg
ggagccccgactggcgagcgcgcaccgcgtcaaccgcagatcactggcagcgagcgcgat
cgtccgcgtggcggcgattcgactcagcgtccttcgccgcgcaaggattcgggcaagcct
ggatcacgtgccccgcgcccggccgacaacagccgtggcacgccggtcgccgagcgtccg
agcgacatgaacaagcgtccggccaagcctgggccgaaacgtgtcggcatcaagctggtc
aacgatgacgcgccgtcaggcaagcgtcgcggtccaccggccggttcaggtcagcgtccc
ggcttcggtcgtcgcaagcctgagtga
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