Pseudomonas cannabina pv. alisalensis: JGS08_07025
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Entry
JGS08_07025 CDS
T07379
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JGS08_07025 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcab01007
]
JGS08_07025 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_07025 (alaS)
Enzymes [BR:
pcab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
JGS08_07025 (alaS)
Amino acid related enzymes [BR:
pcab01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JGS08_07025 (alaS)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JGS08_07025 (alaS)
Prokaryotic type
JGS08_07025 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
QQN23390
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All DBs
Position
1540815..1543439
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AA seq
874 aa
AA seq
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MKSAEIREAFLGFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA
VTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEKWLN
LPKEKLWVTVYATDDEAYDIWTKDIGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPC
SEIFFDHGPEIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLE
RVSAVLQHVHSNYEIDLFQSLLAASAKAIGCSNDNQASLKVVADHIRSCGFLIADGVLPS
NEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVAALVAEMGSAFPELVQQQSHIERVLKG
EEEQFAKTLEQGLKILEQDLADLQGTVVPGEIVFKLYDTYGFPMDLTGDIARERNLTLDE
EGFEREMNAQRVRARSASSFGMDYNSLVKVDVATQFTGYSATTGSATVVALYKEGQSVTH
LNEGEEGVVILDTTPFYAESGGQIGDSGFLLAGDTRFDVSDTTKTGGAFLHHGVVAAGSL
SVGAQVETQVSDEVRNATSLNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFE
AIKPEQLRALEDIVNAEIRKNTPVVTEETDIETAKKKGAMALFGEKYGDSVRVLSMGGEF
SVELCGGIHASRTGDIALFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEAATLV
KGNRDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAAQDVKGVKVLATRLDGQ
DGKALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGG
KGGGRPDMAQGGGVDAGALDAALALTVPFVEQGI
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgcagaaatccgtgaagccttccttggcttcttcgaagagcaaggccacacc
cgtgtcgcttcaagctccttgattccgggcaatgacccgaccctgctgttcaccaacgca
ggcatgaaccagttcaaggactgcttcctgggccaggaaaaacgcgcctacacccgcgca
gtcaccagccagaaatgcgtgcgcgccggtggcaagcacaatgacctggaaaacgtcggc
tataccgctcgtcaccacacttttttcgaaatgctgggtaatttcagctttggtgactat
ttcaagcgtgacgccattacctacgcctggaccttcctgacctccgaaaagtggctgaac
ctgcccaaggaaaagctctgggtcacggtctacgcgactgacgatgaagcctacgatatc
tggaccaaagacatcggcgtgcctgccgagcgtatggtgcgtatcggcgacaacaaaggc
gcgccatacgcttccgacaacttctggaccatgggcgacaccggcccgtgcggtccttgc
agcgagatcttcttcgatcacggtccggaaatctggggcggcccaccgggttcgccggaa
gaagacggcgaccgttacatcgaaatctggaacaacgtgttcatgcagttcaaccgcact
gccgatggtgtgcttcacccgctgccagcgccgtcggttgacactggcatgggccttgag
cgggtcagtgccgttctgcagcacgtgcattccaactacgaaatcgacctgttccagagc
ctgctggctgcttcggccaaggccatcggctgcagcaacgacaaccaggcttcgctgaaa
gtcgtggctgaccacatccgctcgtgcggcttcctgatcgccgacggtgtgttgccgtcc
aacgaaggccgtggctacgtgctgcgccgcatcattcgtcgcgcctgccgtcacggcaac
aagctcggagccaaaggcagcttcttctatcagatcgtggccgcgctggttgccgagatg
gggtctgcgttccctgagctggtgcaacagcagtcgcacatcgaacgtgtgctgaaaggc
gaagaagagcagttcgccaagacccttgagcaggggctgaaaattctcgagcaggacctg
gcggatcttcagggcactgtggttcccggcgaaatcgtgttcaaactgtatgacacctac
ggtttcccgatggacctgaccggcgacatcgcccgcgagcgtaatctgaccctggacgaa
gagggtttcgagcgcgaaatgaacgcccagcgcgtgcgcgcccgttcggccagctcgttc
ggcatggactacaacagtctggtcaaggtcgatgtggccacgcagttcaccggttactcg
gcgaccactggcagcgccaccgtcgttgctctgtataaagaaggccagtcggttacgcac
ttgaacgaaggcgaggagggcgttgtgatcctcgacaccacgccgttctatgcggaatcc
ggtggccagatcggtgacagcggcttcctgctggccggtgacacacgttttgacgtcagc
gacaccaccaagaccggcggcgcgttcctgcaccacggcgtggtcgccgctggcagcctg
agcgtgggtgcccaggtggaaacacaagtgtccgatgaagtgcgcaatgcaacctcattg
aaccattcggccactcacttgctgcacgcggcactgcgccaagtgctgggcgatcacgtt
cagcagaaaggctcgttggtcgacagtcagcgtctgcgctttgacttcagccacttcgag
gccatcaagcccgagcagttgcgtgcgctggaagatatcgtcaacgccgaaattcgcaag
aacacgccggtggtcaccgaagaaaccgacatcgaaactgccaaaaagaagggcgccatg
gcgctgtttggcgagaagtacggcgacagtgttcgggtgctgagcatgggcggcgagttt
tccgtcgagctgtgcggcggtattcacgccagccgcaccggtgatatcgcgttgttcaag
atcgtcagtgaaggcggcgtcgctgccggcgtgcgccgcatcgaagcggtaaccggcgca
gcggcgctggcctggctgaattcggccgaagatcaactcaaggaagccgcgacgctggtc
aaaggcaatcgcgacaacctgctggacaagctgacggcggtgctcgagcgcaatcgtctg
ctggaaaaacaactggaacagctgcaagccaaggcagccagtgctgccggcgacgatctg
tcatcggccgcgcaggatgtcaaaggggtcaaggttctggccacgcgcctggatggtcag
gacggcaaagcgcttctggcgcttgtcgaccagttgaagaacaagctcggccgcgcagtg
atcctgctcggcagtgttcatgaagacaaggttgtcttggtcgcaggcgtgaccaaggac
ctgactggccaactcaaagccggtgatttgatgaagcaggcggccgccgcagtcggtggt
aaaggcggtggtcgtcctgatatggctcaaggcggtggtgtcgatgcaggtgcactggat
gctgcattggcactgaccgttccttttgtagagcaaggaatctga
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