Pseudomonas cannabina pv. alisalensis: JGS08_07330
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Entry
JGS08_07330 CDS
T07379
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
pcab03060
Protein export
pcab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JGS08_07330 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JGS08_07330 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_07330 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_07330 (ffh)
Enzymes [BR:
pcab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JGS08_07330 (ffh)
Secretion system [BR:
pcab02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JGS08_07330 (ffh)
Eukaryotic Sec-SRP protein
JGS08_07330 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
YqeC
APS_kinase
AAA_33
cobW
6PF2K
AAA_31
AAA_26
AAA_28
SLFN-g3_helicase
DnaB_C
KTI12
ParA
Thymidylate_kin
AAA_24
AAA_18
AAA_30
nSTAND3
AAA_19
AAA_16
Mur_ligase_M
MMR_HSR1
ATP_bind_1
TsaE
AAA_5
AAA_17
AAA_14
NACHT
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QQN23439
LinkDB
All DBs
Position
1597592..1598968
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNSVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTPPAVILMAGLQGAGKTTTAGKL
ARFLKERKKKTVMVVSVDVYRPAAIKQLETLANDIGVTFFASDISQKPVEIAQAAIKEAK
LKFIDVVIVDTAGRLHVDVEMMGEIQALHAAVKSAETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLVSGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGMGGMFPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgactgaccgcctctcgcagacgctgcgccatgttaccggcaaggcc
aagctgaacgaggacaacatcaaggataccctgcgcgaagtgcgtatggcgctgcttgaa
gccgacgtcgccttgccggtggtgaaggatttcgtcaacagcgtcaaggagcgtgcggtc
ggcaccgaggtgtcgcgcagtctgacgccgggccaggcgttcgtgaagatcgtccaggcc
gaactcgaaagcctgatgggcgccgccaacgaagatctggtgctcaacgtcacgccgccg
gccgtcatcctcatggcgggtctgcagggtgcgggcaagaccaccacggcaggcaagctg
gcgcgcttcctcaaagaacgcaagaagaaaaccgtgatggtggtgtcggtcgacgtgtac
cgtcccgccgctatcaagcagctcgaaacgctggccaacgacatcggtgttaccttcttt
gcctccgatatcagccagaagccggtcgagatcgctcaggctgctattaaagaagcgaaa
ctcaagttcattgacgtcgtcatcgtcgataccgccggtcgtctgcacgtcgacgtcgag
atgatgggcgagatccaggcgctgcacgctgcggtcaaatcggctgaaacgctgttcgtg
gtcgatgccatgaccggccaggatgccgccaacaccgccaaggcctttggtgacgcgttg
ccactgaccggcgtgattctcaccaaggtcgacggtgatgcgcgagggggggcggccctg
tcggtgcgcgcaatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgag
gcgctggagccgtttcaccccgaccgtatcgcttcgcgaattctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagaccctcgacaaggacaaggccgataagctcgcg
aaaaagctcaagaagggcaagggcttcgacctcgaagacttccgcgatcaattgcagcag
atgaagaacatgggcggccttggcggcctgatggacaaactgccgagcatcggtggcgtc
aatctgtcgcaaatgggcaatgcccagggcgccgctgaaaagcagttcaagcagatggaa
gccatcatcaactcgatgacgccggccgagcgtcgcgatccggatctggtcagtggctcg
cgcaagcgccgtatcgccatgggctcgggtacgcaggttcaggatatcgggcgtctgatc
aagcagcataaacagatgcagaagatgatgaagaagttctccgccaagggcggaatggcg
aaaatgatgcgtggcatgggtggaatgttccccggcggcggcatgccgaaaatgtaa
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