Pseudomonas cannabina pv. alisalensis: JGS08_07465
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Entry
JGS08_07465 CDS
T07379
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JGS08_07465 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcab01007
]
JGS08_07465 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_07465 (lysS)
Enzymes [BR:
pcab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JGS08_07465 (lysS)
Amino acid related enzymes [BR:
pcab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JGS08_07465 (lysS)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JGS08_07465 (lysS)
Prokaryotic type
Other AARSs
JGS08_07465 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QQN23465
LinkDB
All DBs
Position
1635802..1637304
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AA seq
500 aa
AA seq
DB search
MSDQQLDPQALQQEENTLIALRKEKLAAGRAKGQAFPNDFRRDSYCNDLQKQYVDKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLPEETLAEVKTWDLGDIIAAE
GTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRETFR
VRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPSVTDRFELFIGGREIAN
AYSELNDAEDQAERFQAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaacaactcgacccgcaagccctgcaacaggaagaaaacaccctgatcgcc
ctgcgcaaggaaaagcttgctgccggccgtgccaagggtcaggccttccccaacgacttc
cgccgcgacagctactgcaacgacttgcagaaacagtacgtcgacaagaccaaggaagaa
ctggcagaggcagcgattccggtcaaggtcgccggtcgtatcatgctcaaccgcggctcg
ttcatggtcattcaggacatgaccgggcgcattcaggtgtacgtcaatcgcaagaccctg
cctgaagaaaccctggccgaagtgaaaacatgggacctgggtgacatcattgcggccgaa
ggtacgctggcgcgttccggcaagggcgacctgtacgtcgaaatgaccagcgtgcgcctg
ctgaccaaatcgctgcgcccgttgccggacaagcatcacggcctgaccgacaccgaacag
cgctaccgtcagcgttatgtcgacctgatcgtcaacgaagacgtgcgtgaaaccttccgc
gtgcgctcgcaggtcattgcccacatccgcagcttcctgatgaagcgcgacttccttgaa
gtcgaaacgccgatgttgcagaccattcccggcggcgcagcggccaaaccgttcgaaacc
caccacaacgcgctggatatggaaatgttcctgcgtattgcgccggagctgtacctcaag
cgccttgtggtcggcggtttcgaaaaggttttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgacccggcacaaccccgagttcaccatgctcgagttttaccaggcttacgca
gattatgaagacaacatggaccttaccgaggaactgttccgtgagctggcgcagctggtt
ctgggcagcaccgacgtgccttacggcgacaaggtgttccacttcggcgagccgttcgtg
cgcctctcggtgttcgattcgattctcaagtacaaccccgagctgaccgccgccgatctg
caggatgtcgacaaggcacgcgccatcgccaaaaaagccggcgcgaaagtgctgggcttc
gaaggtctgggcaaattgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagccgcacttcatcactcagtacccgttcgaagtgtcgccgctggcacgtcgtaacgat
gaaaacccgagtgttaccgaccgtttcgagctgttcatcggcggccgcgaaattgccaac
gcctattccgagctcaatgatgccgaagatcaggccgaacgcttccaggcgcaagtggcc
gacaaggatgccggtgatgacgaagccatgcactacgacgccgatttcgtgcgtgcgctg
gaatacggcatgccgccaacggcgggtgaggggatcggtatcgatcgcctggtgatgctg
ctcaccaactcaccgtcgatccgggatgtgattcttttcccgcacatgcgcccacaagcg
taa
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