Pseudomonas cannabina pv. alisalensis: JGS08_07760
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Entry
JGS08_07760 CDS
T07379
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_07760 (truD)
Enzymes [BR:
pcab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JGS08_07760 (truD)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JGS08_07760 (truD)
Prokaryotic type
JGS08_07760 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
QQN23522
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All DBs
Position
1701462..1702520
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AA seq
352 aa
AA seq
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MTELELLGPRAWGDALGRAVLKAVAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEEAA
RRLARAAGVPLRTVSYAGLKDRQALTRQWFSIQLPGKADPDLSAAQDETLQILDSGRHKR
KLQRGAHAANGFTLRLTQLDADKDALNQRLEIIARQGIPNYFGTQRFGYQGGNLGEAREY
AARQALPEQRAVRSRLLSTARSYLFNRVLAARVADGSWQQAQVGDLLAFTDSRSFFPAGI
AECSDPRLAILDLHPTGPQWGEGPSPATGTTAALENAITAGESSLRDWLVKAGMEHERRI
LRLPIGRLTWHYPEPDILQLEFVLPPGCFATVLVRELVDLAPVGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcgaactgctgggcccgagggcttggggcgatgcgttgggtcgtgctgtg
ctcaaggccgtcgctgaagactttcaggttgatgaagtgctggatataccgctgtcaggc
gatggcgagcacctgtggttgtgggtcgaaaaacgcggcctgaataccgaggaagcggcc
cgccggctggcgcgtgccgcaggtgttccgttgcgtaccgtcagttatgcaggattgaaa
gaccgccaggcgctgacccgccaatggttcagcattcagttgccaggcaaggccgatcct
gatctttcggcagcgcaggacgaaacgctgcagattctcgacagcggtcgccacaagcga
aaattgcagcgcggtgcccatgcggccaacggtttcacgctcaggctgacgcaactggac
gccgacaaggacgccttgaatcaacgccttgaaataattgcccggcagggtattcccaac
tactttggcacgcagcgtttcggatatcagggcggcaatctgggcgaagctcgtgaatac
gcggcccgtcaagcgctgcccgaacagcgagcggtgcggtcgcggctgttgtccacggcg
cgcagctatctgttcaatcgagtgctggcggcgcgtgttgccgacggcagctggcagcag
gcccaagtgggtgatctgctggcatttaccgacagtcgcagtttttttccggccggtatc
gccgagtgcagcgatcctcgcttggcgattcttgatcttcatcccaccggcccgcaatgg
ggggaaggcccttcgccagcgaccggcacgactgcagcgctcgaaaacgcgatcaccgcc
ggtgagtcttcactgcgtgactggctggtcaaagcgggcatggagcacgaacggcgcatc
ctgcggctgcccattgggcggctgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtccttccgcccggatgcttcgccactgtattggtgcgcgaactcgttgatctg
gcgccggttgggcagacggacagctcatgcgtattctga
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