Pseudomonas cannabina pv. alisalensis: JGS08_07970
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Entry
JGS08_07970 CDS
T07379
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JGS08_07970 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcab01007
]
JGS08_07970 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_07970 (aspS)
03029 Mitochondrial biogenesis [BR:
pcab03029
]
JGS08_07970 (aspS)
Enzymes [BR:
pcab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JGS08_07970 (aspS)
Amino acid related enzymes [BR:
pcab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JGS08_07970 (aspS)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JGS08_07970 (aspS)
Prokaryotic type
Other AARSs
JGS08_07970 (aspS)
Mitochondrial biogenesis [BR:
pcab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JGS08_07970 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QQN23555
LinkDB
All DBs
Position
1742187..1743962
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AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLEGQEITLCGWVHRRRDHGGVIFLDIRDREGMAQVVFDPDRADSFAA
ADRVRSEYVVKVVGKVRARPAGAVNANMASGAIEVLGYELEVLNESETPPFPLNEYSDVG
EETRLRYRFIDLRRPEMAEKLRLRSRITTSIRRYLDDNGFLDVETPILTRATPEGARDYL
VPSRTHPGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLNEEDIIGLTEKMVRQLFKEVLDLEFDEFPHMTFEEAMRRYGSDKPDLRNPLELVDVAD
QLTGVEFKVFSGPANDPKGRVAALRVPGAASMARSQIDDYTKFVSIYGAKGLAYIKVNER
AKGPEGLQSPIVKFIPEENLNVILDRVGAVDGDIVFFGADKFKIVSEALGALRIKIGNDL
KLHTCEWAPMWVVDFPMFEENEDGSFTALHHPFTAPKCTPEELEANPATALSRAYDMVLN
GTELGGGSIRIHRKEMQQAVFRLLGIAEDEQQEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGAQSIREVIAFPKTQSAADVMTQAPGVVDAKALRELHIRLREQPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccattattgcggccaactgaacgagagtctggaaggccaggaaattacc
ctttgcggatgggtccaccgtcgtcgtgaccacggaggcgtgattttcctcgatatccgt
gaccgtgaaggcatggctcaggtagtgttcgaccctgatcgtgcagacagctttgctgcg
gctgaccgtgttcgtagcgagtacgtcgtcaaggtcgtcggcaaggtccgtgcccgtcct
gctggtgctgtgaacgccaatatggcgtcaggcgccatcgaagttctgggttatgagctc
gaagtcctgaacgagtccgagaccccgccgttcccgctgaacgaatattccgacgtaggc
gaagaaacccgtctgcgctatcgcttcatcgacctgcgtcgtccggaaatggctgaaaag
ctgcgtctgcgctcgcgcatcacgaccagcatccgccgctacctggatgacaacggcttc
ctcgatgtcgagacgccgatcctgactcgtgccacaccggaaggcgctcgtgactatctg
gtccctagccgcacacacccgggcagtttcttcgcactgccgcaatcgccgcagttgttc
aagcaactgctgatggtggccggcttcgaccgttactaccagatcgccaagtgtttccgc
gatgaagacctgcgtgccgaccgccagccggaattcacccagatcgacatcgagaccagc
ttcctcaacgaagaagacatcatcggcctgaccgagaagatggttcgtcagttgttcaag
gaagtcctcgacctggagttcgacgaattcccgcacatgaccttcgaagaggccatgcgc
cgctacggttccgacaagccagacctgcgtaacccgctggaactggtcgacgtcgccgat
cagctcaccggcgtcgaattcaaggtgttcagcggtccggccaacgatccgaaagggcgt
gttgccgcgcttcgtgtgccgggcgctgcgagcatggcgcgcagccagatcgacgactac
accaagttcgtcagcatctacggcgccaaaggcctggcctacatcaaggtcaacgaacgt
gcgaaagggccggaaggcttgcagtcgccgatcgtcaagttcatccctgaagaaaacctc
aacgtcattcttgaccgcgtgggtgctgtcgatggcgacatcgtgttcttcggcgccgac
aagttcaagatcgtcagcgaggcccttggcgcgttgcgcatcaagatcggtaacgacctc
aagctgcacacgtgcgaatgggctccgatgtgggtcgtcgacttcccgatgttcgaagag
aacgaagacggcagtttcaccgcattgcaccaccccttcacggcacccaagtgcacgcct
gaagagctggaggccaacccggcaacggcgctgtcccgtgcttacgacatggtcctcaac
ggcaccgagctgggtggcggttcgatccgtatccaccgcaaggaaatgcaacaggcggta
ttccgtctgctgggcatcgccgaagacgagcagcaggagaagttcggcttcctgctcgat
gccttgaagtacggtgcaccgccgcacggtggcctggcattcggtctcgaccgtctggtc
atgctgatgaccggcgcgcagtcgatccgtgaagtgattgcgttcccgaaaacccagagc
gcggccgatgtcatgacccaggcgcctggtgtcgtcgatgccaaggcattgcgtgaattg
cacatccgtctgcgcgagcagccaaaggccgagtga
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