Pseudomonas cannabina pv. alisalensis: JGS08_08265
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Entry
JGS08_08265 CDS
T07379
Name
(GenBank) ATP-dependent helicase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
BBS2_C
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQN24648
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Position
complement(1798651..1800108)
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AA seq
485 aa
AA seq
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MQWTEEQLPAIHSFAKKLLVQAFAGTGKTTTLVGYATHNSSVKMLYLCYNKAVEIAAKNR
FPRNVTCKTAHGLAYAVYGSQYKHKQAGNLRLTDIARTINTQDWELAKDIVSTLNAFMAS
KDLELLEDHFVRFQSNRTLTSVQQQYMSNALNLTRDVWDKMVDIQDRSVSMTHDGYLKLY
QMSQPDLSQRFGAILLDEGQDVNPVIANLVQIQKITQVTVGDRHQQLYRFRGAVDALNSP
AMKDAEKHFLTQSFRFGPAVAYVANVILSFKGEKIPLQGLGQPTLVKRALPEDLPHRTYL
HRTVSGVIENALRLVNQDHRMQWIGGIDSYSLRDLEDLFYFSRHMNDQVQQRKLLTDYAD
YDQYVVIAKATQDPEMLRSIKMIENYPDLPKRIEQLRGASVTSELDATVTLSTAHRAKGL
EWDFVGLYDDFSADPLSPDIDAGKRDDELNLLYVAVTRAMKILAVNSLVIDIMQRFKDMK
QRSRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggacagaagaacaactgccagctattcactccttcgcaaagaagctactggtc
caggcgtttgccggtaccgggaagacaacgacactcgtcggttacgccacgcataactcg
tcggtcaaaatgctgtacctctgctacaacaaagccgttgagatcgcggcaaagaaccgt
tttccacgtaacgtgacctgcaaaacagctcacggcctcgcctacgctgtctatggcagc
cagtacaaacacaagcaggctggcaatctgcgtttgaccgacatcgcgaggacgatcaat
acccaggactgggagctggccaaagatatcgtttcgaccctcaatgccttcatggccagc
aaggatctggagctgctggaagaccactttgtgcgattccagagcaaccgcacactgacc
tcggtccagcagcagtacatgagtaacgcgctcaacctgaccagagacgtttgggacaag
atggtcgatatccaggaccgctcagtctccatgacgcacgacggctatctgaagctgtac
cagatgagccagccggatctgagccagcgcttcggtgcgattttgctcgacgaagggcag
gacgtgaacccggtgatcgcgaacctggtccagatccaaaaaatcacgcaagtgaccgta
ggtgatcggcatcagcaactttatcggttcagaggcgctgtggatgctttaaacagcccg
gctatgaaggacgccgagaagcacttcctgactcagagcttcaggtttgggccggcagtt
gcctacgtggccaacgtcatcctgtccttcaagggtgaaaagatccccctgcaaggcctg
ggacagcccacgttggtgaaacgagccttaccggaggatctacctcaccgaacctacctg
caccgcactgtgagcggtgtgatcgagaacgcgctgcgcctggtcaaccaagaccaccgc
atgcagtggatcggagggatcgacagctattccttgcgtgatctggaggacctgttctat
ttcagccggcatatgaatgaccaggttcagcagcgaaaactgctcactgactatgccgat
tacgaccagtatgtcgtgatcgcgaaggccacgcaggatcctgagatgctgcgctcgatc
aaaatgatcgaaaactaccccgacctgcccaaacgaattgagcaactgcgaggagcctct
gtcacctcggagctcgatgcaacggtgaccctcagcactgcgcacagagccaaaggtctg
gagtgggacttcgttgggctttatgacgacttttctgcggatccgctttcccctgacatc
gacgccggcaaacgcgacgatgagctgaaccttctatacgtcgctgtcacaagagccatg
aagattctggcggtcaactcactcgtgatcgatatcatgcagcgcttcaaggacatgaag
cagcgctcaagaccttga
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