Pseudomonas cannabina pv. alisalensis: JGS08_08305
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Entry
JGS08_08305 CDS
T07379
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_08305 (vsr)
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
JGS08_08305 (vsr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
QQN23609
LinkDB
All DBs
Position
complement(1806918..1807355)
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AA seq
145 aa
AA seq
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MNKLCVSARMKLIKQKDTKPEIVVRRLLHKIGLRFRLHVRELPGTPDISLPRHETVIFVH
GCFWHRHPGCRYASIPKTRQEFWLPKFAANVERDIRKATQLREMGWRVLTVWECETKDVI
ELQARLSSEFFPDPAHPSAVECSSR
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctgtgtgtatctgcacgaatgaagctcatcaagcaaaaggacaccaaacca
gagatagtcgtcaggcgcttgcttcataaaatcgggcttcggtttcgtttgcatgtgaga
gagttacccggcactcctgatatcagcctgcccagacacgaaactgtgattttcgttcat
ggctgcttttggcataggcacccgggttgccgctacgcgtcgattcctaaaacccgtcaa
gagttttggttacctaaatttgcggccaacgtagaaagagacatacgaaaagccacccaa
cttcgtgaaatgggctggcgtgttcttaccgtgtgggagtgcgaaaccaaagatgtgata
gagctacaagcccggctcagcagtgaattttttcctgatccagctcatccaagtgccgtt
gaatgctcaagccgatga
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