Pseudomonas cannabina pv. alisalensis: JGS08_09025
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Entry
JGS08_09025 CDS
T07379
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03030
DNA replication
pcab03430
Mismatch repair
pcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGS08_09025
03430 Mismatch repair
JGS08_09025
03440 Homologous recombination
JGS08_09025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_09025
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_09025
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JGS08_09025
DNA replication proteins [BR:
pcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JGS08_09025
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JGS08_09025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
nSTAND3
iSTAND
Mg_chelatase
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QQN23738
LinkDB
All DBs
Position
1959144..1960130
Genome browser
AA seq
328 aa
AA seq
DB search
MAEAYPWQASLWEQMAGRAQHAHAYLLHGPAGIGKRALAERLMASLLCKTPAGLDACGQC
KSCLLLLAGSHPDNYVLEPEEADKPIKVDQVRDLVSFVVQTAQMGGRKVVLVEPVEAMNV
NAANALLKSLEEPSGNTVLLLVSHQPSRLLPTVKSRCVQQACPLPSEQMSLDWLGCALPD
CTPDERIELLTLAAGSPLAAVSLHAQGVREQRALVVDGVKKLLKQQQSATQLAEGWKDIP
LLLLFDWFCDWSHLILRYQMTQDEEGLGLPDMRKVVQYLAQKSSRGKVLEIQDWILAQRQ
KVMSKANLNRVLLLEALLVQWAGLPGQA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaagcctacccgtggcaggcgtcgctttgggagcagatggccggtcgtgcccag
catgctcacgcctatcttttgcatggtccggccggtattggcaagcgcgcgctggccgag
cggctgatggccagtctgctgtgcaaaacgcccgccgggctggacgcctgcggtcagtgc
aagtcttgcctgttgctgctggcgggcagccatccggacaattacgtgctggaaccggag
gaagcggacaagccgatcaaggtcgatcaagtccgcgatctggtcagtttcgtggtgcag
accgcgcaaatgggcggtcgcaaggtcgtgctcgtcgagccggtggaggccatgaacgtc
aatgcggccaacgccttgctgaaaagtcttgaagagccgtcgggcaacaccgtgctgttg
cttgtcagccatcagccaagccgcctgctgccgaccgtcaaaagccgttgcgtgcagcag
gcctgcccgctgcccagcgagcagatgagcctggactggttgggctgcgccttgcctgac
tgcacgccggacgagcgcatcgaattattgaccctggccgccggttcgccgctggccgcg
gtttcattgcacgcccagggtgttcgcgagcagcgcgcgctggtggtcgacggcgtcaaa
aagcttcttaaacagcagcaatcggcaacccagttggctgaaggctggaaagacattccg
ctgttgttgctgttcgactggttctgcgactggtcgcatttgattctgcgctatcagatg
acccaggacgaagaaggccttggtctgcctgacatgcgcaaggtggtgcagtatctggcg
cagaaatcctctcgcggcaaggtgctggagattcaggactggatactcgcgcaacgccag
aaagtcatgtccaaggccaacctcaatcgggtcttgctgcttgaagcgctgctggtgcag
tgggcagggctgccaggacaggcgtag
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