Pseudomonas cannabina pv. alisalensis: JGS08_09075
Help
Entry
JGS08_09075 CDS
T07379
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcab03016
]
JGS08_09075 (truA)
Enzymes [BR:
pcab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JGS08_09075 (truA)
Transfer RNA biogenesis [BR:
pcab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JGS08_09075 (truA)
Prokaryotic type
JGS08_09075 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
LBD_receptor
Motif
Other DBs
NCBI-ProteinID:
QQN24658
LinkDB
All DBs
Position
1970082..1970906
Genome browser
AA seq
274 aa
AA seq
DB search
MAAEGFSRIALGVEYKGSRYCGWQRQASGVLTVQETLEDALSKVAASPVSLMCAGRTDAG
VHACGQVVHFDTQAERSLKAWVMGANINLPHDISVSWARVMPATFHARFKAIARRYRYVI
YNDQIRPAHLNQEITWNHRPLDVERMAQAAAHLVGTHDFSAFRAGQCQAKSPVKQLHHLR
VTRHGKMIVIDVRANAFLHHMVRNIAGVLMTIGAGERPVEWAREVLESKVRRTGGVTAHP
YGLYLVQVEYRDEFPLPDRYIGPHFLTGFAELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagggcttttcccgaatcgcgctgggcgtggagtacaaaggctcgcgctat
tgcggctggcaacggcaggcgtccggtgtgctgaccgtgcaggaaaccctcgaagacgcg
ctttcgaaagtcgctgcgtcgcccgtctcgctgatgtgtgccgggcgtaccgatgcaggc
gtgcatgcctgcgggcaggtggtgcatttcgatactcaggcagagcgttcactgaaagcc
tgggtcatgggcgcaaatatcaacctgccgcatgacatcagcgtgagctgggcgcgggtc
atgcctgcgacctttcatgcgcgcttcaaggccatcgcccgtcgctatcgctatgtgatt
tacaacgatcagatccgtccggcgcatctgaatcaggaaatcacctggaatcatcgtccg
ctggacgtggagcggatggcgcaagccgccgcgcatctggtggggactcatgacttcagc
gcctttcgcgccggtcagtgccaggccaagtcaccggtcaaacaattgcatcacctgcgc
gtgacccgtcacggcaagatgattgtgatcgatgttcgcgccaatgccttcctgcaccac
atggtgcgcaacatcgctggcgttctgatgaccattggtgcgggtgaaaggccggtcgaa
tgggcgcgtgaggtactggagagcaaggtgcggcgtactggcggtgtgacggcccatcct
tacgggctgtatcttgttcaggtggagtatcgcgacgagtttccgctgccggaccgctac
attggtccgcattttcttacgggttttgcagaacttgacggctga
DBGET
integrated database retrieval system
