Pseudomonas cannabina pv. alisalensis: JGS08_09310
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Entry
JGS08_09310 CDS
T07379
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_09310
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JGS08_09310
Archaeal homologous recombinant proteins
JGS08_09310
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Peptidase_M24_C
Motif
Other DBs
NCBI-ProteinID:
QQN23785
LinkDB
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Position
complement(2023180..2024424)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLAERQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVMWLNDGVLDV
ERLLLPLPDAHGDIKAWCLALPFLRPAEVTGPTLGDDYLRGIGRVHELLIEAANLKRQPG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEER
IRYSGSPIPLSFSEIGYQHQILEIHCDGEALTSVEPLLIPRAVNLQRLGPVPLAELLVQL
KALPDVDLLADPDRQPWLEVRVRLDEPQPDLRNQIETALQGKAVRLVRIGAEYAGKGSAD
GSDGDTALIELDQLSPQELFSRAWLDNYGSEVDEQTLTDFATLLREVQQESEQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctctgactggcacctgggtcagaacctgcacggtcaggagcgg
gacttcgaacacgcctgctttctgacctggctgctggcccgtctggccgaacgacagcct
gatgtgctgctgatcgcgggcgacatcttcgacaccgtcaacccgccggtcaaagctcag
gaacgcctgtacgacttcatcgtcaacgcccatgagcaacaaccgttactgaccatcgta
atgattgccggcaaccatgactcgggctcacgcatcgaactgcctgccccgctgatgcgt
cgcttgcgcacccatgcgctgggcagagtgatgtggctgaacgacggcgtgctggatgtc
gagcgcctgctgctgccactgcccgacgcccatggcgacattaaagcctggtgcctggcg
ctgcccttcctgcgccccgccgaagtgaccggcccgaccctgggcgatgattacctgcgc
ggtatcggccgggtgcatgaattactcatagaggccgccaatctcaagcgccagccgggt
caggccctgatcgccatcagccacgcgcacatggccggcggttcggtttcggaagattcc
gaacgcagtctgatcatcggtaacgccgaagccctgcccgccagcctgttcggaccgagc
atcacctatgtcgcgctgggccatttgcacaagccgcaacgggtcaatggcgaagagcgc
attcgttacagcggctcgcccatcccgctgtcgttttcagaaatcggctatcagcaccag
attctggaaatccattgcgacggcgaagccctgaccagcgtcgagcccttgctgatcccc
cgcgccgtcaacctgcaacgcctcgggcctgttccgctggccgaattgctggtgcaactg
aaggcgctgcccgacgtcgatctgctcgctgacccggatcgtcaaccctggctggaagtg
cgcgtgcgtctggacgagccgcaaccggacctgcgcaaccagatcgagaccgccctgcaa
ggcaaagccgtgcggctggtgcgcattggtgctgaatacgccggcaaaggcagcgccgac
ggcagtgacggcgacacggcattgatcgagctggaccagctcagcccgcaggaactgttc
agtcgtgcctggctggacaattatggcagcgaggtggacgaacagacccttaccgacttc
gccacgctgttgcgtgaagtccagcaggagagcgagcagtcatga
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