Pseudomonas cannabina pv. alisalensis: JGS08_09625
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Entry
JGS08_09625 CDS
T07379
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_09625
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JGS08_09625
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_9
PPP4R2
TetR_C_24
PDZ_3
Motif
Other DBs
NCBI-ProteinID:
QQN23842
LinkDB
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Position
complement(2105822..2106430)
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AA seq
202 aa
AA seq
DB search
MSSIRERNKELILRAASEEFADKGFAASKTSDIAAKAGVPKPNVYYYFKSKENLYREVLE
SIIEPILQASTPFNPDGIPAEVLSRYIRSKIQISRELPFASKVFASEIMHGAPHLTPEQI
EQLNDQARHNIACIQAWIDSGQIAPIDPHHLMFTIWAATQTYADFDWQIATVTGKAKLEE
ADYEAATQTILRLVLKGCEPDH
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatccgcgagcgcaacaaagaactcatcctgcgtgccgccagcgaggaattc
gccgacaagggtttcgctgccagcaagaccagcgacatcgccgccaaggccggtgtaccc
aagcccaacgtctactactacttcaagtccaaggaaaacctctatcgcgaggtgctggaa
agtatcatcgagcccattttgcaagcgtcgacgcccttcaaccccgacggcatcccggcc
gaggtgctcagccgttacatccgctcgaaaatccagatatcccgtgagctgcccttcgcc
tcgaaagtcttcgccagcgaaatcatgcacggcgctccgcacctcacgcctgaacagatc
gaacaactcaatgaccaggcccggcacaacatcgcgtgcatacaggcctggatcgacagc
gggcagatcgccccgatcgatcctcaccatctgatgttcactatctgggccgcaacccag
acctacgccgacttcgactggcagattgcgacggttaccggcaaggcgaagctggaggaa
gcggattatgaagcggccacgcagaccattctcaggctggtgctcaagggctgcgagccg
gatcactga
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