Pseudomonas cannabina pv. alisalensis: JGS08_09805
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Entry
JGS08_09805 CDS
T07379
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00230
Purine metabolism
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
pcab01232
Nucleotide metabolism
Module
pcab_M00546
Purine degradation, xanthine => urea
pcab_M00958
Adenine ribonucleotide degradation, AMP => Urate
pcab_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
JGS08_09805 (xdhB)
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
JGS08_09805 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
QQN23872
LinkDB
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Position
complement(2148363..2150741)
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AA seq
792 aa
AA seq
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MSEHKIPLTQADMLAVFQQGLSTGVGRSVKHDSADKHVSGEAVYIDDRLEFPNQLHVYAR
LSDRAHARIISIDTSPCYAFEGVKIAITQEDIPGLKDIGPLLPGDPLLAIDKVEFVGQPV
LAVAARDLDVARQAAMAAIIEYEDLEPVLDVVQALRQKHFVLDSHTHKRGDSATALEGAN
HRLQGNLHIGGQEHFYLETQISSVMPTEDGGMIVYCSTQNPTEIQKLVAEVLDVPMNRVV
VDMRRMGGGFGGKETQAASPACLCAVIARLTGQPTKMRLQRFEDMQMTGKRHPFYIEYDV
GFDDDGRLQGIELDLAANCGYSPDLSASIVDRAMFHADNAYYLGEATINGHRCKTHTASN
TAYRGFGGPQGMVAIEEVMDCIARFLGKDPLAVRKANYYGKTERNVTHYYQTVEHNLLEE
MTADLEQSSQYAERREAIRAFNASSPILKKGLALTPVKFGISFTASFLNQAGALIHIYTD
GSIHLNHGGTEMGQGLNTKVAQVVAEVFQVDIERIQITATNTDKVPNTSPTAASSGTDLN
GKAAQNAAEILKQRLVDFAARHYAVAETEVEFRNGHVRIGEIVLPFAELAQQAWMGQVSL
SSTGYYKTPKIFYDRSQARGRPFYYYAFGAACVEVIVDTLTGEYKTLRTDILHDVGASLN
PAIDIGQVEGGYIQGAGWLPTEELVWNDKGKLMTSGPASYKIPAVADMPLDLRVKLVENR
KNPEDTVFHSKAVGEPPFMLGIAAWCAIKDAVASLGDYRHQPNIDAPATPEKVLWGCEQM
RQLHTAKAHPYE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagcacaaaatcccactgacccaggccgacatgctggctgtgtttcaacagggt
ttgagcaccggcgtggggcgcagcgtcaagcacgacagcgccgacaagcacgtctccggc
gaagcggtgtatatcgacgaccgcctggagtttcccaatcagttgcatgtgtacgcacga
ctgtcggaccgcgcccatgcacggatcatcagcatcgacacctcgccctgctacgcgttt
gaaggcgtaaaaatcgcgattacccaagaggatatccccggcctgaaagacatcggaccg
ctgttaccgggcgatccgctgctggccatcgacaaagtggaattcgtcggccagccggtg
cttgccgtggccgcgcgggatctggacgttgcgcgccaggcggcaatggcggcaatcatc
gaatacgaagacctggagccagtgctggacgtggttcaggccctgcgccagaaacatttc
gtgctcgacagccacacccacaagcgcggcgattcggcgacggctctggaaggcgcaaac
caccgtttgcaaggcaacctgcacattggtggccaggaacacttctatctggagactcag
atttcctcggtcatgccgactgaagatggcggcatgatcgtttactgttcgacccagaac
cccacggaaatccagaagctggtggccgaggtgctggacgtaccgatgaaccgcgtcgtg
gtcgacatgcggcgcatgggcggaggtttcggcggcaaggagacccaggcggccagcccg
gcgtgcctgtgcgcagtgattgcgcgcctgaccggtcagccgaccaagatgcgcctgcaa
cgcttcgaagacatgcagatgaccggcaaacgccacccgttctatatcgaatatgacgtg
ggctttgatgacgacggccggttgcaaggtatcgaactggatctggccgccaactgcggc
tattcgccagacctgtcggcctcgattgtcgaccgtgcgatgttccatgccgacaacgcc
tattacctgggcgaagcgacgatcaatggccatcgctgcaagactcacacggcgtccaac
accgcctatcgcggctttggcgggccgcaaggcatggttgccatcgaagaagtcatggac
tgcatcgcccgttttctcggcaaggacccgcttgcagtgcgcaaggccaactactacggc
aagaccgagcgcaacgttacgcattactaccagacggtcgagcacaatctgctggaagaa
atgaccgcagacctggagcagagcagccagtacgctgagcgccgcgaagccattcgagcc
ttcaatgccagcagcccgatcctgaaaaaaggcctggcactgacgccggtcaagttcggc
atttcgttcaccgccagctttctcaaccaggccggcgcgctgattcacatctacaccgac
ggcagcatccatctgaaccacggcggcaccgagatgggccagggtttgaacaccaaggtc
gcgcaggtcgtggcagaagtgtttcaagttgatatcgagcgtatccagatcaccgccacc
aacactgacaaagtgccgaacacctcgccgacggcggcgtccagcggcactgacctgaat
ggcaaggcggcgcagaatgcggcggaaatcctcaagcagcgcctggttgattttgccgcg
cggcattacgcagtggcagaaaccgaggttgaatttcgcaacggtcatgtgcggatcggt
gagattgttttgccctttgccgagctggctcaacaggcgtggatgggtcaggtgtcgctg
tccagcaccggctactacaagacgccgaagattttctatgaccgcagccaggcgcgcggt
agaccgttctactactacgcgttcggtgcagcctgcgtcgaggtgatcgtcgataccctg
accggtgaatacaagaccttgcgcaccgacatcctgcacgatgtcggcgcgtcgctgaac
ccggccatagacatcggccaggtcgaaggcggctacattcagggcgcgggctggctgccc
accgaagagctggtgtggaacgacaaaggcaagctgatgaccagcggtccggcgtcgtac
aagatcccggcggtggctgacatgccgctggacttgcgcgtcaagctggtggaaaaccgc
aagaacccggaagacacagtgttccattccaaggccgtgggcgagccgccgttcatgctc
ggcatcgcggcgtggtgcgcgatcaaggacgccgtggcgagcctcggtgattatcgtcat
cagccgaacatcgacgctccggctacgccggaaaaggtgttgtggggctgtgagcagatg
cgtcagttgcacacggcaaaggctcacccctatgaataa
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