Pseudomonas cannabina pv. alisalensis: JGS08_09820
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Entry
JGS08_09820 CDS
T07379
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcab03036
]
JGS08_09820 (smc)
Chromosome and associated proteins [BR:
pcab03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JGS08_09820 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
ABC_tran
BORCS7
Motif
Other DBs
NCBI-ProteinID:
QQN23875
LinkDB
All DBs
Position
2153129..2156617
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTSRKPVSQASIELAFDNSDGTLVGEYAAYAEISIRRKVTRDSQNSYYLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQAL
NEQVGQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAERARLETESHLGHDTTLLATLGEELEMLEPEQEMTS
AAAEESAIALEDAEAAMQGWQEKWDAFNQQSAEPQRQAQVQQSRIQQLEQSIERLAERQR
RLAEERQLLAADPEDAAILELSEDLATRDLTLEELHMGEEQAVERLEQLREALQNASQAQ
QQAQGELQRLNGRLASLEALQQAALDPDTGTAEWLRDQQLTERPRLAEGLSVEAGWELAV
ETVLGADLQAVLVDDFDGLDLAGFQQGDLRLLSAGADAVRVPGSLLEKVESTVDLSAWLG
QVFPVENLDEALARRTHLSAGQSLISRDGYWVGRHFLRVRRASEAQSGVLARGQELQRLG
LERDEREATLATLEEQLLSLREQQSQQEDAREQLRRRVQDETRQQSELKAQLSAAKVKVE
QLTLRRARLDEELAELAEQRAAEHEQLGESRLQLQDALDAMAQDTEQREVLQAQRDSLRE
RLDRIRQDARQHKDHSHQLAVRLGSIKAQYDSTRQALERLRMQSERLTEKREQLSLNLEE
GEAPLEELRLKLEELLERRMVVDDEMRIAKNALEDADRELREAEKRRTQAEQQAQLLRGQ
LEQQRLEWQSLTVRRTALQDQLQEDGYDLHGVLATLTPEASEQAAEQQLESIAGRIQRLG
AINLAAIDEYQQQSERKRYLDAQDADLVEALDTLENVIRKIDKETRNRFKDTFDQINSGI
QALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQTVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEAMALVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaagtgcatcaagctggcggggttcaaatctttcgtcgaccccaccacggtg
aacttccccagcaacatggcggctgtcgtcggccctaacgggtgcggcaaatccaacatc
atcgacgccgtgcgctgggtcatgggcgagagctcggccaagaacctgcgtggcgagtcg
atgaccgatgtcatcttcaatggctcgaccagccgcaagccggtcagccaggcgagcatc
gagctggcgttcgacaactccgacggcacgctggtaggtgagtacgcggcctatgcggaa
atttcgattcgccgcaaagtgacgcgcgacagccagaacagctattaccttaacggcacc
aaatgccgtcgccgcgacattaccgacatcttcctcggcaccggcctgggcccgcgcagc
tattcgatcatcgagcagggcatgatctccaagctgatcgaagccaagcccgaggatctg
cgcaacttcatcgaagaagccgccgggatctccaagtacaaggagcgacgccgggagacc
gaaaaccgcatccgccgcacccacgaaaacctcgcgcgcctgaccgaccttcgcgaagag
ctggagcgacagctggagcgcctgcaccgccaggctcaggccgccgagaagtatcaggaa
tacaaggccgaggagcgtcagctcaaggcacagctatcggccttgcgctggcaggcgctg
aacgaacaggtcggtcagcgtgaggcggtgatcggcaatcaggaagtcggcttcgaagcg
ttggtggctgatcagcgcagtgccgatgccagcatcgagcggctgcgcgacggccatcat
gatctgtccgaacgtttcaatctggtgcaggggcgcttctattcggtcggcggcgacatt
gcccgcgtcgagcagagcatccagcacggccagcaacgcctgcgtcagttgcaggacgat
ctgcgcgaagccgagcgcgcccgcctggaaaccgaatcgcacctgggccacgacaccacc
ttgctcgcgaccctcggcgaagagctggaaatgctcgagcccgagcaggaaatgaccagt
gctgccgccgaagaatcagccatcgcgctggaagacgccgaagccgccatgcagggctgg
caggaaaagtgggacgccttcaatcagcaatccgccgagccgcagcgccaggcgcaagtt
cagcaatcgcgcattcagcaactcgaacagagcatcgagcggctggccgagcgccagcga
cgtctggccgaggaacggcagttgctggcggccgacccggaagacgcggccattcttgaa
ctgagtgaagaccttgccacccgcgacctgacccttgaagagctgcacatgggcgaagag
caggcggtcgagcgtctggaacaattgcgcgaggcgctgcaaaacgccagtcaggcgcaa
cagcaggcgcaaggcgagctgcagcggctcaatggccgactggcctcgctggaggccctg
caacaggcggcgctcgatccggataccggcaccgccgaatggctgcgcgatcagcagctg
accgagcgcccgcgtctggccgaggggctgagtgtcgaggctggctgggaactggcggtg
gaaaccgttttaggggccgatttgcaggcggtgctggtcgatgactttgacgggctcgat
ctggccggtttccagcagggcgatctgcgtttgctgagcgccggtgctgacgcggttcgc
gtgccgggcagcttgctggagaaagtcgaaagtacggtcgatctgtcggcctggctgggt
caggtgtttccggtcgagaacctcgacgaagcgttggcgcggcgcacgcacttgagcgcc
gggcaaagtctgatcagccgtgatggctattgggtcggtcggcattttttacgggtcagg
cgcgccagcgaagcacagagcggcgtgttggcgcgtggccaggaattgcagcggttgggg
ctggaacgcgacgagcgcgaagcgaccctggcaacgctggaagaacagttgctgagcctg
cgcgagcaacagtcgcagcaggaagatgcccgcgagcaactgcgccgtcgcgtgcaggac
gaaacccgtcagcaaagcgagctcaaggcgcaattgtcggcggccaaagtgaaggtcgaa
cagttgaccctgcgccgcgcgcgtctggacgaagagctggccgaactggccgaacagcgt
gccgccgagcacgaacagctcggcgagtcgcgcctgcaattgcaggacgcgctggacgcc
atggcgcaagacaccgagcagcgcgaagtgctgcaggcgcaacgcgactcgttgcgcgag
cgtctggaccggatacgccaggatgcccgtcagcacaaggaccacagccatcagctggcg
gtgcgcctgggctcgatcaaagcacaatacgattcgacacgtcaggcgctcgagcgcctg
cgcatgcagtccgaaaggctgacggaaaaacgcgaacagctcagcctcaatctggaggag
ggcgaggcaccgctcgaagagctgcgcctcaagctggaagagctgctggagcggcgcatg
gtggtcgacgacgaaatgcgcatcgccaagaacgcgctggaagacgccgaccgcgagctg
cgcgaggcagagaagcgccgcacccaggctgagcagcaagcgcaactgctgcgcggccag
ctggaacagcaacgactggaatggcagtcgctgaccgtacgccgcaccgccttgcaggat
cagttgcaggaagacggctacgacttgcacggcgtgctcgccacgctgaccccggaggcc
agcgagcaggccgccgagcagcaactggaaagcatcgccgggcgtattcagcgtctgggc
gcgatcaaccttgcggccatcgacgaataccagcagcagtccgagcgcaaacgttatctg
gacgcgcaggacgccgaccttgtggaagcgctcgataccctggagaacgtgatccgcaag
atcgacaaggaaacccgaaaccgcttcaaagataccttcgatcagataaatagcggaatt
caggcactttttccgaaagttttcggtggaggctctgcttatttggaactgacgggcgaa
gatctactcgatacaggggtgacaatcatggcgcgcccccccggcaagaagaacagcacc
atccacttgctgtccggtggggaaaaagccctgactgcgctggcgctggtttttgccatt
ttcaagcttaatcctgcgccgttctgcatgctcgatgaggtggatgcgccgctggatgat
gccaacgtgggtcgttatgcgcgtttagtgaaagaaatgtcacaaacggtgcagttcatc
tacatcacccacaacaagatcgccatggaaatggctgatcaactgatgggggtgacgatg
cacgagcccggttgttcgcggctcgtggctgtggatgtggaagaggccatggcgctggtg
gatgcctga
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integrated database retrieval system
