Pseudomonas cannabina pv. alisalensis: JGS08_09865
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Entry
JGS08_09865 CDS
T07379
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab03030
DNA replication
pcab03430
Mismatch repair
pcab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGS08_09865 (dnaX)
03430 Mismatch repair
JGS08_09865 (dnaX)
03440 Homologous recombination
JGS08_09865 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcab03032
]
JGS08_09865 (dnaX)
03400 DNA repair and recombination proteins [BR:
pcab03400
]
JGS08_09865 (dnaX)
Enzymes [BR:
pcab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JGS08_09865 (dnaX)
DNA replication proteins [BR:
pcab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JGS08_09865 (dnaX)
DNA repair and recombination proteins [BR:
pcab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JGS08_09865 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_18
TIP49
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
Band_7
Rad17
DUF3646
SKI
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QQN23883
LinkDB
All DBs
Position
2166655..2168808
Genome browser
AA seq
717 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGVLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSEDAPRQPLKPVGISQATVDSRKAVADATPVASAPPVAPVMAAPDPAFEALPPAQAAA
IKPEPEPVSAPEAKPEPVEEVDLPWNEPKASAAEKAPDAAPEVEPEAEPVAEPVLETVSE
QPDLTPMPTPAPASPVPDAPEAEPSPVEEQQVTPAMLEAIPDSAYLSAPMDRDDEPPADD
DYVEPDIDIDPASYSYLDELAHESVVELEAVEPEPAPAAMPATGLAAEWLEVFPKLPISG
MTGSIAANCTLMAVDGDNWLLHLDPAHSALFNSTQQRRLNDALNQYHGRTINLSIELIKP
EQETPAQAASRLRAERQRQAEASIQADPYIQQMLQQFGAVIREDTIKPVDAPEVQPQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggctcatgtgctcaaggccctgatcaacgcgctggacagccagcgcctgcaccacgcc
tacttgttcaccggtacgcggggcgtcggcaaaaccacgattgcgcggatcatcgccaag
tgcctgaactgcgaaaccggtattacctcgacgccctgcggcacctgctcggtgtgcaag
gagatcgacgaagggcgttttgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaagacacccgtgagttgctggacaacgtgcagtacgcgcccagtcgcggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccactcgttcaacgccttgctc
aagacacttgaagagccgccgccttacgtcaagttcatccttgcgaccacagacccgcaa
aaactgccggcgaccatcctgtcgcgctgcttgcagttttcgctgaaaaacatgacgccc
gagcgtgtggtcgaacacctgacccatgtgctgggcgtcgagaacgtgccgttcgaagat
gacgcgctgtggctgttgggccgcgctgccgacggttcgatgcgcgatgccatgagtctg
accgatcaggcgattgccttcggcgaaggcaaggtcatggccgccgatgtgcgtgccatg
ctcggtacgctggatcatggtcaggtcttcgatgtgctgaccgcgctgctggaaggtgat
gcgcgcggtgtgctggaggccgtgcgccatctggccgagcagggccctgactggaacggc
gtgctctcggaaatactcaacgtgctgcaccgcgtggcgattgcccaggcattgcctgaa
ggggtcgacaacgggcatggcgaccgcgaccgggtgttggccctggcgcaggcgctgcct
gccgaagatgtgcagttctattaccagatgggcctgatcggtcgtcgtgatctgccgttg
gcgcctgacccgcgcggcggtttcgagatggtcctgttgcgcatgctggcgttccgcccg
gccgacagcgaagacgcgcccaggcagccactaaagccggtggggatcagccaggccacg
gttgattcccgaaaagcagtggctgatgcgacacctgttgcatcggcgccgccggtagcg
ccggtgatggcggctcccgatccggcttttgaagcgctgccgcctgcgcaggcggcggct
ataaagcccgagcccgagcccgtgtcagcgccagaagcaaagcccgagccggtcgaagaa
gtcgatctgccgtggaatgaacccaaagcgtcggctgccgaaaaagcgcccgacgcagcg
cccgaagtcgagcccgaggcagaaccggtcgccgaaccggtactggaaaccgtttccgag
cagcccgacctcacgccgatgccgacccctgcgcccgccagcccggtgccggatgcgccg
gaggccgagccttcgccggtcgaggaacagcaagtcacgcctgcgatgctcgaagcgatt
ccggattcagcctacctgtcagcgcctatggatcgcgatgacgagccgccagcggacgac
gattacgtcgagccggatatcgacatcgatccggcctcctacagctatctggacgaactg
gcacacgaaagtgtcgtggaactggaagcggtcgagcccgaaccggcgcccgctgccatg
ccggccacggggctcgctgccgagtggctggaagtgtttccaaaattgccgatctccggc
atgaccggcagtattgcggcaaactgcacgctgatggcggtcgatggcgacaactggctg
ctgcacctcgatccggcgcacagtgcgctgttcaactcgacccagcagcgccgtctgaac
gatgcgttgaaccagtaccatgggcgcacgatcaatctgagtatcgagctgatcaagccc
gagcaggaaaccccggcgcaggccgcgtcgcgcttgcgtgccgaacgccagcgtcaggct
gaagcttcgattcaggctgatccgtacatccagcagatgctgcaacaatttggcgcggtg
atccgcgaagacacgatcaaaccggtggatgcgcccgaagtgcagcctcaatga
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