Pseudomonas cannabina pv. alisalensis: JGS08_10425
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Entry
JGS08_10425 CDS
T07379
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcab01011
]
JGS08_10425
Enzymes [BR:
pcab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JGS08_10425
Peptidoglycan biosynthesis and degradation proteins [BR:
pcab01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JGS08_10425
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
QQN23986
LinkDB
All DBs
Position
complement(2285326..2287254)
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AA seq
642 aa
AA seq
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MRSRLFSFLSCLLLSATAVQTAHAADLNQQRKYYDEAKRALAKGDSGPYQMYATALADYP
LEPYLEYDELTARLKTASNAEIEKFLAEHGDLPQANWMKLRWLRWLAERGDWQPFVKYYD
PKMKFVELDCLYGQYQLNNNKRAEGYASAEKLWMTGKTLPAACDGFFAQWAAAGQLTEQK
RWQRAKLAAQARNYSLATTLVNSLNSLAPQGRLLLAVAQKPEMVNNPGQFVPVDEAMSDV
VGLGLRRLAKQDPQKTLSMLDSYAATMHFSREEQVEIAKEIGLTLARRYDDRALEVMTRY
DPELRDDTVTEWRLRLLLRLGRWEDAYELARRLPKDLAATNRWRYWEARSLELAQPNSPL
IAALYKDVAKERDFYGFLAADRTQSPYQLNNKPLVLSQALINKVRNTPGVRRALEFHDRG
EIVNGRREWYHVSRLFNRDEMVAQAKLAYDMQWYFPAIRTISQAQYWDDLDIRFPMAHRD
TLVREARVRGLHSSWVFAITRQESAFMDDARSGVGAAGLMQLMPATAKETARKYSIPLAS
PQQVLDPDTNIQLGAAYLSSVHAQFNGNRVLASAAYNAGPGRVRQWLKGANHLAFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERFFDDL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgtttgttcagctttttatcgtgcctgctcctctccgccactgccgttcag
actgctcatgcggccgacctcaaccaacaacgcaagtattacgacgaggcaaagcgcgca
ctggccaagggcgattcagggccctatcagatgtacgccacggcattggccgactatccg
ctggagccgtatctcgaatacgacgagctgaccgcgcgcctgaaaacggcgagcaacgcc
gagatcgagaagtttctggccgaacatggtgacctcccccaggccaactggatgaaactg
cgctggttacgctggctggcagagcgcggtgactggcaacccttcgtcaagtattacgac
ccgaaaatgaagttcgtcgagctggactgcctgtatgggcagtatcagttgaacaataat
aaacgcgccgaaggctacgccagtgccgaaaagctctggatgaccggcaagaccttgccg
gctgcctgtgacggattcttcgcccaatgggccgcagcaggccagttgacggaacagaag
cgctggcagcgcgccaagctggcagcgcaggcccgcaactacagcctggccaccaccttg
gtcaacagcctcaattcactggccccgcaaggacgcctgctgctggcagtcgcccagaag
ccggaaatggtcaacaaccccgggcaattcgtaccggtagacgaagccatgtccgatgtg
gtcggtctgggcttgcgccgcctggccaagcaggacccgcagaaaaccctgtcgatgctc
gacagctacgccgcgaccatgcacttctcgcgtgaagagcaagtcgagatcgccaaggag
atcggcctgaccctggcccgtcgttacgacgaccgcgcgctcgaagtcatgacccggtac
gaccccgagctgcgcgacgacacggtcaccgaatggcgtctgcgcctgctgctgcgcctg
ggtcgctgggaagacgcctacgaactggcacgtcggctgcccaaggatctggcggcgacc
aatcgctggcgttactgggaagcccgttcgctggaactggcacaacccaacagcccgctg
attgctgcgctgtacaaggacgttgccaaggaacgcgacttctatgggtttctcgctgcc
gaccgcacccagagcccgtaccagctcaataacaagccgctggtgctcagccaggcgctg
atcaacaaggttcgcaacacgccgggcgtgcgtcgcgcgctggagtttcatgatcgcggc
gagatcgtcaacggccgacgcgagtggtatcacgtcagccgcctgttcaatcgcgacgaa
atggttgcgcaggccaaactggcctacgacatgcaatggtatttcccggcaatccgcacc
atcagtcaggcgcagtactgggacgacctggacatccgcttcccgatggcgcatcgcgac
acactggtacgcgaagccagggtacgagggctgcactcaagctgggtgtttgcgattacc
cgtcaggaaagcgcgttcatggacgatgcccgctcgggcgtcggcgctgccggcctgatg
caactgatgccggcgaccgccaaagagaccgcgcgcaagtacagcatcccgctcgcctcg
ccgcagcaggtgctggacccggacaccaatatccagctgggcgccgcctatctgagctcg
gtgcatgcccagttcaacggtaaccgggtgctcgcttcggccgcctataacgctggcccc
ggtcgcgtgcggcagtggctcaaaggcgcgaaccacctggccttcgatgtctgggtagaa
agcatcccgttcgacgaaacccggcagtacgtgcagaacgtgttgtcttattcggtgatc
tacggccagaagctcaactcgcctcaaccgctggtcgattggcacgagcgtttcttcgac
gacctctga
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