Pseudomonas cannabina pv. alisalensis: JGS08_10830
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Entry
JGS08_10830 CDS
T07379
Name
(GenBank) cache domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02020
Two-component system
pcab02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JGS08_10830
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JGS08_10830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcab02035
]
JGS08_10830
Bacterial motility proteins [BR:
pcab02035
]
Flagellar system
Chemotaxis proteins
MCPs
JGS08_10830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
FPP
Laminin_I
DUF948
Fib_alpha
GIT1_C
TolA_bind_tri
Syntaxin
ATG17_like
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
QQN24057
LinkDB
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Position
2375627..2377306
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AA seq
559 aa
AA seq
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MRLSLKAKVLSLAVLPVLMFALVISATTVFMLHNQAEREVSDTRERLLSEAKATLQNYVA
IAMTVIKPLYDAAAPGDEAARANAIKLLSAVSYGKDGYLFGYDSQVIRIFRSTSPDGVGK
SFSEARDANGVYLNRELVAVGKAGTHYVMYSSALPGKTEPVPKIGYTDYLPKWDLVIGSA
VNLDGIDAQVAVVRQNVEARLQEMLYSILGITVLVLVIISAIGIVMTGTLLRPLGLMKNN
LDDIAAGEGDLTRRLAITSNDELGDLASSFNRFVDKIHGMVRQISSMTGQLNGLVGEVSA
QAQRSETAMDRQRHETGQVATAINEMSAAAQEVAKSAQGASVAAQQTDEQGRTAKRVVDG
SIKQIHALVDDIRKSGSSLDVLQKDVSSIVSVLGVIRSIAEQTNLLALNAAIEAARAGEA
GRGFAVVADEVRALASRTQQSTQEIQGMIDRLQQGTQEAVTAMRRSSEAGDGTSTQANEA
GQSLVTIGELIATINAMNAQIASAAEEQTAVAEEINRSVHQIAGAVESVADETRQSAQTS
RSLAELGASLDRLVGQFRV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcagtctgaaagccaaagttctgtcgctggcggtcttgccggtcctgatgttc
gcgctggtgatcagcgccacgacggtgttcatgctgcacaatcaggccgagcgagaggtc
agcgatacgcgagagcgcctgctctccgaagccaaggcaaccctgcagaactacgtggca
attgccatgaccgtcataaaacctctctatgacgcggcagcgccaggtgatgaagccgcg
cgcgccaacgccatcaaactgctttcagcggtcagttacggcaaggacggttacttattc
ggctacgactcgcaggtcatccgcatctttcgcagcaccagcccggatggcgtgggaaag
agcttcagtgaagctcgtgacgccaacggtgtgtatctcaaccgcgagttggtggcggtc
ggcaaggcgggtacccactacgtgatgtactcatcggccctgccgggcaagaccgaacct
gttcccaagatcggctacaccgattacctgcccaagtgggatctggtcatcggttctgcc
gtcaaccttgatggtatcgacgctcaagtggcggtggtcaggcagaacgtcgaagcgcgg
ttacaggagatgctctacagcattctggggattaccgttctggtactggtcatcatcagc
gccatcgggatagtgatgaccggcaccttgctgcgtccgctgggtttgatgaaaaacaac
ctggacgacatcgctgcgggtgaaggtgatctgaccaggcgtctcgccattaccagcaac
gatgaactgggtgatctggcgagttcgttcaaccggtttgtcgacaagattcacggcatg
gttcgtcagatcagcagtatgaccgggcagctcaacggtctggtcggagaagtttcggca
caggcgcaacgttcagaaaccgccatggatcgtcagcgccacgaaaccggtcaggtggcc
accgcgatcaacgaaatgtcggctgctgcacaggaagtcgccaaaagcgcacaaggtgct
tcggttgccgcgcagcagaccgacgagcaagggcgtaccgccaaacgggtggtggatggc
agcatcaagcagattcatgcgctggtggatgacatccgtaaaagtggttcttcgctggac
gtcttgcagaaggatgtatcttcaattgtcagcgtgttgggggtcattcgctcgattgcc
gaacagaccaacctgcttgcactcaatgccgccatcgaggccgcaagggcaggggaagcg
gggcgcggctttgccgtggtggccgatgaggttcgggccctggccagtcgcacccaacag
agcacccaggaaatccagggcatgatcgaccgcctgcaacaaggtactcaggaagcggtc
actgccatgcgccgatccagcgaggccggtgatggtacgtcaacgcaagccaacgaggca
ggccagtcgctggtgaccattggtgagctgatcgcgaccatcaatgccatgaacgcgcag
attgccagcgccgccgaagaacagacggcagtggctgaagaaatcaatcgcagcgttcac
cagatcgccggtgcggttgaaagcgtcgctgacgagacgcggcagagcgcccagacttcg
cgcagcctcgccgagctgggcgcaagcctcgacaggctggtcggtcagttccgggtttga
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