Pseudomonas cannabina pv. alisalensis: JGS08_10970
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Entry
JGS08_10970 CDS
T07379
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00020
Citrate cycle (TCA cycle)
pcab00480
Glutathione metabolism
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
pcab01120
Microbial metabolism in diverse environments
pcab01200
Carbon metabolism
pcab01210
2-Oxocarboxylic acid metabolism
pcab01230
Biosynthesis of amino acids
Module
pcab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcab_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JGS08_10970
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JGS08_10970
Enzymes [BR:
pcab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
JGS08_10970
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Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
QQN24084
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Position
complement(2406149..2408371)
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AA seq
740 aa
AA seq
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MSNRSKIIYTFTDEAPALATYSLLPIIEAFTATSDIDVETRDISLAGRVLSSFPESLADK
KVPDHLAELGKLATTPEANIIKLPNISASVPQLKATIKELQNQGYNIPDYPENPATDAEK
ETRARYDKTKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKAHVAHMSNGD
FYGSEKATQIEADNTVKIELVAQDGTTTVLKEKTAVKAGEVVDCSVMSAKALRSFIAAEI
EDARKQGVLFSVHLKATMMKISDPIMFGQIVDEFYKDALTKHADTLKQIGFSLNNGIGDL
YERIGVLPAEKQAEIKADVEAVYAVRPQLAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWGTDGQLHDAKAVIPDRCYATIYQAVIDDCKKNGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFHIQTNGVVRVTDSQGKLLMEQNVETGDIWRMCQAKDAPIQDWVKLAVNRARAS
NTPAIFWLDSSRAHDRVMIEKVQKYLGDHDTSGLDIQILSPVEAMKLTLERTRAGKDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFVEENFLR
WDSLGEFLALAASLEHLGNAYNNPKALVLSKTLDQATGEFLDRNKSPSRKVGGIDNRGSH
FYLTLFWAQALAAQDEDAALKAQFAPLAKTLTDNEEKIVAELNAVQGKPVDIGGYYFPNP
EVTSKAMRPSATFNAAIAAL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgctcgaagatcatctacaccttcaccgacgaagctccggccctcgccacc
tactccctgttgcctattatcgaagcgttcacggcaacctccgatatcgacgtggaaaca
cgcgacatttctctggcgggccgtgttctttccagcttcccggagtcgcttgctgataaa
aaagtgccggatcatctcgccgagctgggcaagctggccaccacgccagaagccaacatc
atcaagctgccgaacatcagtgcttcggtcccgcaattgaaggcgaccatcaaggagctt
cagaatcagggctacaacattcctgactaccctgagaaccctgccaccgacgcagaaaaa
gaaacccgcgcacgttacgacaagaccaagggcagcgccgtaaacccggttctgcgtgaa
ggcaactccgaccgccgcgcacctttgtcggtcaagaactacgcacgcaagcacccgcac
aagatgggcgcctggtcagccgattccaaagcccacgttgcgcacatgagcaacggtgac
ttctacggcagcgaaaaagccactcagatcgaagccgacaacaccgtcaagatcgaactg
gtcgctcaggatggcaccaccaccgttctgaaagaaaaaactgccgtcaaggctggcgaa
gtcgtcgattgctcggtcatgagcgccaaggcgctgcgcagcttcatcgccgctgaaatc
gaagacgcccgcaagcaaggcgtgctgttttcggtgcatctgaaagcaaccatgatgaag
atctctgatccgatcatgttcggccagatcgtcgacgagttctacaaggacgcattgacc
aagcatgctgacacgctgaaacagatcggcttcagcctgaacaacggcatcggcgacctg
tacgagcgcatcggcgttctgccagcggaaaagcaggctgaaatcaaggctgatgtagaa
gcggtttacgcggtccgtccacagctggcgatggtcaactccgacaagggcatcaccaac
ctgcacgtgccgagcgacgtgatcgtcgacgcatcgatgccagccatgatccgtgactcc
ggcaaaatgtggggcacagacggtcagttgcacgatgccaaagcggtgatcccggatcgc
tgctacgccactatctatcaagctgtcatcgacgactgcaagaaaaacggcgccttcgat
ccaaccaccatgggcagcgtgccaaacgttggcctgatggcgcagaaagccgaagagtac
ggttcgcacgacaagactttccacatccagaccaatggtgtggttcgcgtcaccgacagc
cagggcaagctgctcatggagcagaatgtcgaaaccggcgacatctggcgcatgtgtcag
gccaaggacgcaccgatccaggattgggtaaaactggctgtcaaccgcgctcgcgccagc
aacacgccagcgattttctggctggattcgtcccgcgctcatgaccgcgtgatgatcgag
aaagtgcagaagtacctgggcgaccatgacacgtcaggtctggacatccagatcctgtcg
ccggtcgaagcgatgaaactgaccctggagcgcactcgcgccggcaaggacaccatctcg
gtgaccggtaacgtgctgcgcgattacctcaccgacctgttccctatcatggaactgggc
accagtgcgaagatgctgtcgatcgtcccgctgatgaacggtggcggcctgttcgaaacc
ggcgctggcggttcggcaccaaagcacgttcagcagttcgtcgaagagaacttcctgcgc
tgggactcgctaggcgaattcctggctctggcagcttcgctggaacacctgggcaacgcg
tacaacaacccgaaagcgctggtgctttccaagaccctcgaccaggcgactggcgagttt
ctggatcgcaacaaatcgccatcgcgcaaggtcggcggcatcgacaaccgtggcagccac
ttctacctgaccctgttctgggcacaggcactggccgctcaggacgaagacgcagccctc
aaggcgcagttcgcgcctttggccaaaaccctgaccgacaacgaagaaaaaatcgttgcc
gaactgaacgctgttcagggcaagccggtggacatcggtggctactacttccctaacccg
gaagtaaccagcaaagccatgcgcccaagcgcaacattcaacgcagccatcgccgcgttg
taa
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