Pseudomonas cannabina pv. alisalensis: JGS08_11110
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Entry
JGS08_11110 CDS
T07379
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_11110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_11110
02044 Secretion system [BR:
pcab02044
]
JGS08_11110
Transporters [BR:
pcab02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JGS08_11110
Secretion system [BR:
pcab02044
]
Type I secretion system
Multiple protein transporter
JGS08_11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_25
nSTAND1
AAA_33
DUF87
SbcC_Walker_B
AAA_29
DUF5480
DUF1270
nSTAND3
RsgA_GTPase
AAA_30
STAS
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
QQN24110
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Position
2437041..2438831
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AA seq
596 aa
AA seq
DB search
MSALPHSAQPPLYKALADYKSALIGVGCFTALINVLMLAPSIYMLQVYDRVLTSQNQTTL
AMLTLMVVGFFAFIGLLEMIRSFVVIRIGSELEKRFNLRVYQAAFESNLHAGQRQAGQAL
GDLSFIRQFLTGPALFAFFDAPWFPVYLAVIFLFDPWLGVLASVGTVLLVALACLNEWLT
RKPLAEASGYSQQSAQLATRHLQQAEAIQAMGMLEALRRRWFSVHGRFLALQNRASDTGA
VISSISKALRLCLQSLVLGLGALLVIRGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWS
SARLAYGRLDQLLKTYAEPAPRMPLPAPRGQITAEQVSAAPPGRTSPTVQQVSFQLQAGE
VLGVLGASGSGKSTLARVLVGVWPLLGGTVRLDGADMHRWDREALGPYIGYLPQDIELFS
GTVAENIARFRDDDGTAVVAAARLAGVHELILRLPQGYDTRLGDDGGGLSGGQKQRVALA
RALYGEPRLVVLDEPNSNLDAAGEAALTQAIGELKARGCTVVLVTHRTPSLTQTDRLLVL
SEGRMQAFGPTAQVLQALSGQAPQAQTAEPQPQPRPVPTGISMSRQYGAQNRQTDV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgttgccccatagcgcccagccgccgctttataaagcgctggcggattataag
agcgcgttgatcggcgtcggttgttttaccgcgctgatcaacgtattgatgctcgccccg
tcgatttacatgctgcaggtctatgaccgtgtcttgacctcgcagaatcagaccacattg
gccatgctgaccctaatggtggtcggattctttgcctttatcggcttgctggaaatgatc
cgcagctttgtggtcatccgcattggcagcgagctggaaaagcgtttcaatctgcgtgtc
taccaggctgcgttcgagagcaacctgcacgccgggcaacgtcaggccggtcaggcgctc
ggcgatctgtcctttatccgccagttcctcaccggccctgcgttgtttgcattcttcgac
gcgccctggtttcccgtttatctggcggtgatttttctgttcgatccctggctgggcgtg
ctggccagcgtcggcacggtgctgctggtcgcgctggcgtgcctgaatgaatggctgacc
cgtaagccattagccgaggccagtggctattcgcagcagtctgcgcaattggcgactcgt
catctgcaacaggccgaggccattcaggccatgggcatgctggaggcgttgcgacgtcgc
tggttctccgtgcacgggcgctttctggcgctgcagaaccgcgccagcgacaccggcgcg
gtgatcagctcgatcagtaaagcgctgcgcctgtgtctgcaatcgctggtgttggggctt
ggcgcactgctggtgatccgtggcgacatgacggccgggatgatgatcgccggttcgatc
ctgatgggacgcgttctgagtcccatcgaccagttgattgccgtctggaaacaatggagt
tccgcacgcctggcttacgggcgcctcgatcagttgctcaagacttacgccgaacctgcg
ccgcgcatgccgctgccggcaccgcgcggtcagatcaccgcagagcaggtcagcgccgca
cctccgggcagaacctcgccgacggtgcaacaagtgagttttcagttgcaggccggggag
gtgcttggcgtgctgggcgcgtccggctctggcaagtcgaccctcgcccgagtgctggtg
ggggtgtggccgttgctcggcggcacggtgcggctggacggtgctgacatgcatcgctgg
gatcgcgaggcgcttgggccctacatcggttatttgccgcaggacatcgaactgttcagt
ggcaccgtggccgagaatattgcgcgtttccgtgatgacgacgggactgcggtggtggct
gccgcgcgactggcgggtgtgcatgagctgattctgcgcctgccgcaaggttacgacacg
cgcttgggcgatgatggcggcggcttgtctggtggccagaaacagcgcgttgcgttggct
cgggcgttgtatggcgaaccacgactggtggtcctggacgaacccaactccaatctggat
gccgctggtgaagcggcgctcacccaggcaatcggtgagctcaaggcccgaggctgcacg
gtggtgctcgtgactcaccgtacgccttcactgactcagaccgatcgtctgctggtactg
agcgagggtcgcatgcaggccttcgggccaacggcgcaagtccttcaggcgctgtcagga
caggcaccgcaggcgcaaaccgccgagccacaaccgcaacctcgcccggtgccgaccggg
atttccatgagccgccagtacggcgcccagaacaggcagaccgacgtatga
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