KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_11215
Entry
JGS08_11215       CDS       T07379                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JGS08_11215 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcab02044]
    JGS08_11215 (gspD)
Secretion system [BR:pcab02044]
 Type II secretion system
  General secretion pathway protein
   JGS08_11215 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QQN24129
LinkDB
Position
2459766..2462087
AA seq 773 aa
MGTFSGVPAIATLRTPLLCLATAVALGGCASQSDTLDPDNGMLQEALQGTGSQRPPVDPR
SERPPVEPPSQQTPASPQRQIIKGNQRFIRQPAAAPAARPGETGDIVFNFTNQPIQAVIN
SIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETLLSWTDNAMIKQGNRYVILP
SSQAVAGKLVPEMRVAQPSAGMSARLFPLRYISATEMQKLLKPFARENAFLLVDPARNVL
SLAGTPEELANYQDTIDTFDVDWLKGMSVGVFGLQRASVGELMPELQKMFGPESGMPLAG
MVRFLPIERTNSVVAISSQPEYLHEVGEWIHTIDEGGGNEPQMYVYDVRNMKATDLAKYL
RQIYGTGAIKDDSPAKVAPGLRTTTLSSLNSSGGGAGGMSSSSGLGGNSSGMSSGGAFGS
SQGLNNSQNSANSESESDDQSGGDSDSASQDDSGSTGNGKSLDASTRITAQKSSNQLLVR
TRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMGVQWYLGRLAGNSGTTGNVT
NTPGSQGSIGTGGAALAATDSFFYSFVSNNLQVALRALETNGRTQVLSAPSLVVMNNQQA
QIQVGDNIPISQTTVNTNASATTLSSVEYVQTGVILDVVPRINPGGLVYMDIQQQVSDAD
NSANSTDLNGNPRISTRSVSTQVAAQSGQTVLLGGLIKQDNAESVSAVPYLGRIPGLKWL
FGNTSKSKDRTELIVLITPRVITSSSQARQVTDDYRQQMQLLKPEVSRTSMQN
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgggtaccttttctggagttcctgccatcgctaccttgcgcacacccttgctttgcctg
gccaccgccgtcgcccttggcggctgcgcgtcacagtcagacacactcgatcccgacaat
ggcatgctgcaggaagcgctccagggaaccgggtcacaacgcccgccagtagacccgcgc
agcgagcgtccgccggtcgagccaccttcccagcagacgccggcctcgccgcagcgccag
atcatcaagggcaaccagcgtttcatccgccagcctgcggcggccccggcagcgcgtccg
ggcgagaccggtgacattgtcttcaatttcaccaaccagccgattcaggcggtgatcaac
agcatcatgggcgatttgctgcacgagaattacagcattgcccaaggcgtgaagggcgat
gtcagtttctcgacctccaaaccggtcaacaagcagcaggcgctgtcgattctcgaaacg
ctgctgtcctggaccgacaacgccatgatcaagcagggcaaccgctacgttatcctgcct
tccagtcaggcggtggccggcaagctggttccggaaatgcgcgtggcacaaccgtcggcg
ggcatgtcggcgcggctgtttccgttgcgttacatttcagccaccgaaatgcagaaactg
ctcaagccgttcgcccgggaaaacgcgttcctgctggtcgacccggcgcgcaacgtgctc
agcctggcgggcacccccgaagagctggccaactatcaggacaccatcgacaccttcgat
gtggactggctgaaaggcatgtcggttggcgtattcggtctgcaacgcgcctcggttggc
gagctgatgcctgaactgcagaagatgttcggcccggaaagcggcatgccgctcgcgggc
atggtgcgctttctgcccatcgagcggaccaattcggtggtggcaatctcttcgcagccc
gagtacctgcacgaagtcggcgagtggattcacaccatcgatgagggcggcggcaacgag
ccacagatgtacgtgtatgacgtgcgcaacatgaaagccaccgatctggccaagtacctg
cggcagatctacggcacgggcgcgatcaaggatgactcgcctgccaaggtggcgccgggg
ctgcgcaccaccacgctgtcgtcgctcaattccagcggcggtggcgcgggcggcatgagc
agctccagcggcctgggcggtaacagcagcggcatgagcagtggtggcgcttttggcagc
agccaggggctgaacaacagccagaacagtgccaacagcgaatcggagagcgacgaccag
agcggcggcgactcggattccgccagtcaggatgacagcggctcgacgggcaacggcaag
tcgctcgatgccagcacgcgcatcactgcacagaagagcagcaaccagttgctggtgcgc
acgcgtcctgcacaatggaaggaaatcgagtcggccatcaaacgcctcgacaacccgccg
ctgcaagtgcagatcgagacgcgcattctggaagtcaagctgactggcgaactggacatg
ggggtgcagtggtacctggggcgtctggcaggtaattcgggtacgactggaaacgtcacc
aacactccgggcagccagggatcgatcggtaccggcggcgctgcattggctgcaactgac
tcgttcttctactccttcgtcagcaataacctgcaagtggcactgcgtgcgctggaaacc
aacggccgcacccaagtgttgtcggcaccctcgctggtggtcatgaacaaccagcaggcg
cagattcaggtcggcgacaatatcccgatcagccagaccacggtcaacaccaacgcctcg
gccaccacgctgagcagcgtcgaatacgtgcagaccggtgtcattctcgacgttgtgccg
cgcatcaatccgggcggcctggtgtacatggatattcagcagcaagtgagtgacgccgac
aacagcgccaactccactgacctgaatggcaatccgcgtatttcgacccgctcggtgtcg
acccaagtggccgcgcagagtggtcagacggtgctgttgggcggcctgatcaagcaggac
aacgccgagtcggtcagcgctgtgccttatctcgggcgcatccccggcctgaaatggttg
ttcggcaataccagcaaatccaaggaccgcaccgagctgatcgtgctgatcacgcctcgg
gtcatcaccagcagcagccaggcgcgtcaggtgacggatgactaccgtcagcagatgcaa
ttgctcaaacccgaggtttcgcggaccagcatgcagaattga

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