Pseudomonas cannabina pv. alisalensis: JGS08_11250
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Entry
JGS08_11250 CDS
T07379
Name
(GenBank) efflux RND transporter permease subunit
KO
K21134
multidrug efflux pump
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_11250
Transporters [BR:
pcab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JGS08_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QQN24134
LinkDB
All DBs
Position
complement(2467683..2470721)
Genome browser
AA seq
1012 aa
AA seq
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MKERFNLSAWGLRHRTLVWYLMFVSLLMGSWSFLNLGREEDPSFAIKTMVIQARWPGATL
PDTLQQVTDRLEKKLEEIDALDYVKSYTLAGESTIFVFLKSETRSADIPAAWYQVRKKIN
DVRAELPSGIQGPAFNDEFGDVFGSIYAFTADGLSFRQLRDYVEQVRADIRSVPNLGKIE
LLGAQREVIYLNFSIRKLAALGIDQRQVLQSLQAQNSVTPAGVMEAGPERIAVRASGQFS
SEEDLEAVNLRFGDRFFRLSDLATIERRYADPPSSLFRFNGQPAIGLAVAMKQGGNIQAF
GTQLQQRIEDLTTELPLGIDVHLVSSQAEVVENAIGGFTHALFEAILIVLVVSFISLGIR
AGLVVACSIPLVLALVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEMMVTRLESG
DSLPQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNSSSAGEYVFTMFAVIAVALLLSWLV
AVLFAPLISVHILKASAQHAAPGRWARGFSHLLNKALDYRGWVIGLTVLLFIGSLFAGKL
LQNQFFPDSDRPEILVDIYMPQNSSIDGTRQTMDRFEATLKDDPDVLRWSSYVGKGAVRF
YLPLDQQLSNPFYGQLVIVSQGGAARDRLIERLRQRFREDYVGVGGYVQPLNMGPPVGWP
VQYRVSGPDIEQVRSQAMALAAILDANPNIGQVIYDWNEPGKVLKIDIAQDKVRQFGLSS
EDVAQILNSLVTGTTITQVRDSTYLIDLVGRAESDERSSVQTLSNLQIPTPDGSTVPLLA
FATLGYEQEQPLVWRRDRLPTITLKANVLGKLQPAALVKQLKPEVDAFSANLPLRYSVAT
GGAVEASARSQGPILKVVPLMLLLVVSFLMIQLHSVKKILLVVSVVPLGLIGVVAALLIS
GYPLGFVAILGVLALIGIIIRNSVILVTQIDEFIAAGESAWSSVVKATEHRCRPILLTAA
AASLGMIPIAREVFWGPMAIAMIGGIAMATLLTLFFLPALYVVSYGIRRPIS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggagcgtttcaatctgtcggcctgggggctcaggcatcgcacactggtctggtac
ttgatgttcgtttcactgctgatgggcagttggtcattcctgaatctgggccgcgaggaa
gatccgtcgttcgccatcaagaccatggtcattcaggcccgctggccgggtgcgaccttg
cccgacaccctgcaacaggtcaccgaccggctggaaaagaagcttgaggaaatcgatgcg
ctggattacgtaaaaagttacacgctggccggtgaatcaacgattttcgtattcctcaag
agtgaaacccgcagcgccgacatcccggccgcgtggtatcaggtgcgcaaaaagatcaac
gacgtgcgcgccgagctgccaagcggcattcagggcccggcgttcaacgacgaattcggt
gacgtattcggtagcatctacgccttcaccgccgatggtctttcgtttcgccaactgcgt
gattacgtcgaacaggtacgcgccgatatccgcagcgtgcccaacctgggcaagatcgaa
ctgctcggcgcgcagcgcgaagtcatctacctgaatttttccatccgcaaactggcggcg
ctcggcatcgatcaacgtcaggtgctgcaaagcctgcaagcgcagaactcggtcactccg
gcaggcgtcatggaagccgggcccgagcgcattgcggtgcgtgccagcggtcagttcagc
agtgaagaagaccttgaggcggtcaacctgcgtttcggcgaccggttcttccgcctcagc
gatctggcgaccattgaacgccgttatgccgacccgccctcctcgctgttccgtttcaac
ggccaaccggcgatcggcctggcggtggccatgaagcaaggcggcaacattcaggcgttc
ggcacgcaattgcagcagcgcatcgaggatctgaccaccgaactgccgctgggcatcgac
gtgcatctggtgtccagccaggcggaagtggtcgaaaacgccatcggcggcttcacccac
gcgctgttcgaagcgatcctgattgtgctggtggtcagcttcatcagcctcggcattcgt
gccggtctggtcgtcgcctgctcgattccgctggtattggcgctggtcttcgtcttcatg
gagtacagcggcatcaccatgcagcgcatctcgctcggcgcgctgatcatcgccctcggg
ctgctggtcgacgacgcgatgatcaccgtggaaatgatggtcacccgcctggaaagcggc
gactcgctaccgcaggccgccacttacgcttacacctcgaccgcattcccgatgctgact
ggcacattggtgacggtggccggtttcgtgcccatcggcctgaattccagttcagcgggc
gaatacgtgttcaccatgttcgccgtcatcgccgtggcgctattgctgtcctggctggtg
gcggtgctgtttgcgccgctgatcagcgtgcacatcctcaaggcctcggcgcaacacgcc
gcgccaggccgctgggcgcggggtttcagtcacctgctgaacaaggcgctcgactatcgc
gggtgggtaatcggcctcaccgtgctgctgttcatcggctcgctgttcgccggcaaactg
ctgcaaaaccagttctttccggattccgaccgcccggaaattctggtcgatatctacatg
ccgcaaaacagttccatcgacggcacgcgccagaccatggatcgctttgaagccacgctc
aaggacgatcccgatgtgctgcgctggagctcatatgtcggcaagggcgcggtgcgtttc
tacctgccgctggatcaacaattgagcaacccgttctacgggcaactggtgatcgtcagt
cagggtggcgcagcgcgtgatcgcctgatcgaacgcctgcgacagcgctttcgggaggac
tacgtcggcgtgggtggctacgtgcagccgctgaacatgggcccgcccgtcggctggccg
gtgcagtatcgagtcagtggcccggacatcgaacaggtccgcagccaggccatggcgctg
gccgccattctcgacgccaaccccaatataggccaggtgatctatgactggaacgaaccg
ggcaaggtactgaagatcgacatcgcccaggacaaagtgcgtcagtttggcctgtcgtcc
gaagacgtggcgcaaatcctcaacagtctggtcacaggcaccaccatcacccaagtgcgt
gacagcacttacctgatcgacctggtaggccgcgccgaaagcgacgaacgcagctcggtg
cagaccctcagcaacctgcaaatcccgacaccggatggttcgaccgtgccactgctggca
ttcgccacactcggttacgagcaggagcaaccactggtctggcgtcgtgaccggttgcct
accatcaccctcaaggccaacgtgctgggcaagctgcaaccggccgcactggtcaagcaa
ttgaaaccggaggtcgacgccttcagcgccaacctgccactgcgctactcggtcgccacc
ggaggagcagtcgaggccagcgcacgctcacaagggccgatcctgaaagtcgtgccgctg
atgctgctattggtagtgagttttctgatgatccagctgcacagcgtgaaaaagatcctg
ctggtggtcagcgtggtgccactcgggctgatcggggtggtcgctgcgttgttgatttcc
ggctacccgctgggcttcgtggcgatcctcggcgtgctggcgctgatcggcatcatcatc
cgcaactcggtaatcctggtgacccagatcgacgaattcatcgccgcgggtgaaagtgcc
tggtcgtcggtggtcaaagccaccgaacaccgctgccgcccgattctgctgaccgcggcg
gccgcaagtctcggcatgatcccgattgcccgcgaagtgttctgggggccgatggccatc
gccatgatcggcggcatcgccatggccaccttgctgacgttgttttttctgccggcgctg
tatgtggtgagttatgggatcaggcggccaataagctga
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