Pseudomonas cannabina pv. alisalensis: JGS08_11490
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Entry
JGS08_11490 CDS
T07379
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_11490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_11490
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JGS08_11490
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QQN24174
LinkDB
All DBs
Position
complement(2524643..2526265)
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AA seq
540 aa
AA seq
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MKLWPQRLPWLLCLALTAMFTHTPPAMARGETPVDQLVIGMSMINLLSLDPAGATGLEVS
EVNANLYDMLLEQDAARPDQLVPALAERWEISPDRMRLTFHLRPGVTFHSGNPLTAQDVA
WSLQRVVTLNKALASTWKAYGYTASNVSELMRAEGSSTFVLDLPKATDPMLVLNTLATSP
SAFVIDRLTALQHAKGDDLGAGWLTTHAAGSGAFKLDIWRANDVILMTRFDSYWRGPAKM
RRVIMRNMTESQALRLMVERGDLDVARGMAASDIQALTRSRDVSVQTIPRGTLYYVALSM
EQPLFQDIRVRQAIRALIDYQGINNVIMPHYGVINQRPLQLGLAARLDDPGYTLNVAKAR
QLLAEAGHPNGFKITIRSLTDSPFINIATSLQSTLAQAGIQASIITGTGNQIYGAMRDRR
FDILVGRGGGGAERHPHSSLRALIYNPDNREEARLSNFQGWRTSFYSAEINQLIEQAERE
RDARQQLADYQRIQTLYDQKAGPIMPVSQMTDEVVIHADVQEYAGHSAATTRLRDVYKQR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctggccccagcgcctgccctggctgctatgtctcgccctgacggcgatgttc
acgcacaccccgcccgccatggcgcgtggcgaaacaccggtcgatcaactggtgatcggc
atgagcatgatcaacctgctgtcgctcgacccggcgggtgctaccggccttgaagtgtcc
gaagtcaacgccaacctctacgacatgctgctggaacaggatgccgcgcgccccgaccaa
ctggttccggcactggcagagcgctgggaaatcagcccagaccgcatgcgcctgacgttt
cacctgcgtccgggcgtgacctttcattccggcaatcccctcaccgcccaggatgtcgcc
tggtcgctgcaacgcgtggtgacgctcaacaaagcgctggcctcgacctggaaagcctat
ggctacaccgcaagcaacgtcagcgaactgatgcgcgccgaggggtcttcaaccttcgtg
ctcgacctgcccaaagccaccgatccgatgctggtgctcaacaccctggccacctcgccc
agtgcgtttgtcatcgaccgcctgaccgcgctgcaacacgccaagggcgatgatctgggc
gcaggctggctgaccacccatgcggcgggctcaggggcattcaagctggacatctggcgc
gccaacgacgtgatcctgatgacccgcttcgactcgtactggcgcggcccggcgaagatg
cgtcgggtcatcatgcgcaacatgaccgagtcgcaggccctgcgtctgatggtcgagcgc
ggtgatctggacgtggcgcgcggcatggcggccagcgacattcaggccctgacccgctcc
agagacgtcagcgtgcagaccattccgcgcggcacactgtattacgtcgcgctgagcatg
gagcagcctttgtttcaggacatccgcgtgcgccaagcgattcgcgcactgatcgattat
cagggcatcaacaacgtcatcatgccgcattatggcgtgatcaatcagcgcccgctgcaa
ctggggctggcggccaggctcgatgatccgggctacacgctgaatgtcgccaaagccagg
caactgttggccgaagccgggcatccgaatggcttcaagatcaccatccgctcgctgacc
gactcgccgttcatcaacatcgccaccagcctgcaatcgaccctcgcccaggcgggcatt
caggcgtcgatcattaccggcaccggcaaccagatctacggagccatgcgcgaccggcgt
ttcgacattctggtcggtcgtggcggcggcggtgccgaacgtcatccacactccagcctg
cgagcactgatctacaacccggacaaccgcgaagaagcccgattgagcaactttcagggc
tggcgtacctcgttctatagcgccgagatcaaccagttgatcgagcaggccgagcgcgag
cgcgatgcacgtcagcaactggccgactaccagcgcatccagacgctctatgaccagaaa
gcaggcccgatcatgccggtttcgcagatgactgacgaagtggtcatccacgccgatgtt
caggaatacgcaggccacagcgccgcgaccacgcgcctgcgtgacgtctacaagcaacgc
tga
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