Pseudomonas cannabina pv. alisalensis: JGS08_11590
Help
Entry
JGS08_11590 CDS
T07379
Name
(GenBank) nucleoid-structuring protein H-NS
KO
K01666
4-hydroxy 2-oxovalerate aldolase [EC:
4.1.3.39
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00360
Phenylalanine metabolism
pcab00362
Benzoate degradation
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
pcab01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
JGS08_11590
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JGS08_11590
00622 Xylene degradation
JGS08_11590
00621 Dioxin degradation
JGS08_11590
Enzymes [BR:
pcab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
JGS08_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
TatD_DNase
Motif
Other DBs
NCBI-ProteinID:
QQN24193
LinkDB
All DBs
Position
2550443..2551471
Genome browser
AA seq
342 aa
AA seq
DB search
MANVKILDVTLRDGGYRNNFDFTEDQARVITTGLADAGVDLCEIGYCKGSFSPRNEHGLT
SNVDALFIERIVQAAAGRIELAVMVHPRNITVDDFAMLKEQGVSMIRVCLRRDQLDEGLA
TLSLARDHGFSVSANVTHVTSQTPGSVLDTAVRAEGAGADIICCADSNGHMLPTEVHRLF
SRLASRLMVPLGFHAHNNLSLALANASAAIEAGAEYIDTSICGMGKGAGNLHLSMLVAYL
ERVGISHGYDLVNIIELSEATARSIPQNNMPSPLMDIILGTYNFPFDVSQRMRETIERFQ
LTSEYRAIEVMHQQDQVARLAPRALLSGVINDLPRAARGVSL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtaaagattctcgacgtcaccttgcgtgacggtggatatcgaaacaacttt
gacttcacggaagatcaagcccgggtcattaccacaggtctggctgatgcgggtgtcgat
ttgtgtgaaataggctattgcaaaggctcgttttctcccaggaacgaacatgggctgacc
agcaatgtcgatgcactcttcattgaaagaatagttcaggcagccgctggacgtattgaa
ctggccgtcatggttcacccccgcaatatcaccgtcgacgatttcgccatgctcaaggag
caaggtgtttcgatgattcgggtctgcctgcgccgcgatcaactggacgagggccttgcg
acattatcgctggcgcgtgatcacggtttcagtgtcagtgccaatgtcacgcatgtgaca
tcgcagacgccggggtcagtcctcgatacggccgttcgggcggaaggtgccggcgcagac
atcatttgctgcgcggattccaatggccatatgttgcccaccgaagtgcaccggttgttc
agtcgtcttgccagtcggttgatggtgccactggggtttcatgcccataacaacctctcg
ctggcgttggcgaatgcctcggcggccatcgaagccggtgctgaatacatcgatacatcc
atctgcggcatgggcaaaggggcggggaatctgcacttgagcatgctcgtggcttatctg
gaacgcgtcggcatcagtcatggctacgacctggtgaacattatcgaactgtcagaggct
acggcccgttcgataccgcagaacaatatgcccagcccgctgatggatatcatcctcggt
acttacaactttcctttcgatgtcagccagcgcatgagggaaaccatcgaacggtttcag
ttgacctccgagtaccgtgcgatcgaggtcatgcaccaacaggatcaggtcgcgcgcctt
gccccgcgagccttgttgtcgggcgtcatcaatgacttgcccagagcggcgcgcggggtg
tcgctatga
DBGET
integrated database retrieval system
