KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_11700
Entry
JGS08_11700       CDS       T07379                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JGS08_11700 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcab02044]
    JGS08_11700 (gspD)
Secretion system [BR:pcab02044]
 Type II secretion system
  General secretion pathway protein
   JGS08_11700 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QQN24213
LinkDB
Position
2568702..2571056
AA seq 784 aa
MKESFFNHVRQCRWTAPLLLMALGACSTSSPAPPLLVESELGQPLARTARSGDPLLDRQR
TQPAVEPRPGAQRSTPGNRSQAGSRRAGPPRNVLGDQPVQLNFVDTDIQAVVRALSRSTG
QQFLLDPRVTGTLTLVSEGQVPAAQAYDMLLAALRMRGFSVVDVGGVAQVVPEADAKLLG
GPIYSADKASANGMLTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNNTIVVTDYAEN
LTRVAQIIDGIDTPSAIDTDVVAVQNGIAVDIASMVAELLDTPAGDPTQKISVIGDPRSN
SIIIRAGSPERTELARSLIYKLDNAQSNPSNLHVVYLRNAQAGKLAQALRGLLTGENDSS
AASDTTRSTLSSMGATGTTNSGQGNGAATSGGTSGMGSGSGGYNQNAGASPVVATGNQQA
DQNTAFSAGGVTIQADATTNTLLISAPEPLYRNLREVIDQLDQRRAQVVIESLIVEVSED
DASQFGVQWQTGNLSGNGGFGGVNLGGSGLNSNGGTSIDVLPQGLNVGVVRGAVTIPGIG
EVLDLKVLARALKSKGGSNVLSTPNLLTLDNEAASIFVGQTIPFVTGSYVTGGGGTSNNP
FQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVSSVDQRASLEAGTVTNKRAIDTSILLD
DGQIMVLGGLLQDGYNQSNNAVPWLSNIPLLGVLFRNEARSTSKTNLMVFLRPYIIRDSG
AGRSITLNRYDFMRRAQGNLQPERNWALPDTQAPQLPSAVRAIPDLVPAPSQMPRATIRA
VPAP
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgaaggaatcgtttttcaatcatgtgcggcagtgtcgctggaccgcaccgttgttgttg
atggcactgggtgcatgcagcacttcatcacccgcgccccctttgctggtcgagagcgaa
ctgggtcagccgctggccagaaccgcgcgcagcggtgatccgctattggaccgtcagcgc
acacaacctgctgtcgaaccaaggcccggcgcgcagcgttcaacgcccggcaaccgcagc
caggcaggttcgcgccgggctgggccgccacgcaatgtgctgggcgatcaaccggtgcaa
ctgaattttgtcgacaccgatattcaggcggtggtgcgggcgttatcgcgctccaccggc
cagcagtttttgctcgatcctcgcgttaccggcaccctgacgctggtcagcgaaggccag
gtgcctgctgctcaggcctatgacatgctgctcgcggcattgcgcatgcgcggcttcagc
gtggtcgatgtcggcggtgtcgcgcaggtggtgcccgaagccgacgctaaattgttgggc
gggccgatctacagtgccgacaaggcgtcggccaacggcatgctgacccgtaccttccgg
ctgcaatacgaaaacgcagtgaatctgatcccggtgctgcggcccatcgtttcaccgaac
aacccgatcaatgcttatccgggcaacaacaccatcgtggtcaccgattacgccgagaac
ctgacgcgcgtggcgcagattatcgacggcatcgatacgcccagcgccatcgacacggat
gtcgtggcggtgcagaacggcattgccgtggacattgccagcatggtcgctgaactgctg
gataccccggccggcgatccgacccagaaaatcagcgtgatcggcgacccgcgctccaat
tcgatcatcatccgcgctggcagcccggagcgtaccgagctggcgcgcagcctgatctac
aaactggacaacgcccagagcaacccgagcaacctgcacgtggtgtacctgcgcaatgct
caggcaggcaagctggcgcaggcgttgcgcggtctgctcaccggtgaaaacgacagcagc
gctgccagtgacacgacccgctcaacgctcagcagcatgggcgctacgggcaccactaac
agcgggcagggcaacggcgctgctaccagcggcggcacttccggcatgggcagtggctcc
ggcggatacaaccagaacgccggtgcctcacccgtcgtagccaccggtaaccagcaggcc
gatcagaacaccgcgttcagtgcaggcggcgtgacgattcaggcggatgccactaccaat
accttgctgatctccgcgccggaaccgctgtaccgtaacttgcgcgaggtcatcgatcag
ctcgatcaacgccgcgctcaagtggtgatcgagagcctgattgtcgaggtcagcgaagac
gatgccagccagttcggtgtgcaatggcagaccggcaacctcagcggcaacggcggcttt
ggcggtgtgaatctcggcggcagcggcctgaacagcaacggcggcaccagcattgacgta
ttgccgcaaggcttgaacgttggcgtggtgcgcggtgctgtgaccattcccgggataggt
gaagtgctcgacctcaaggtgctggcccgggcgctgaagagcaagggcggcagcaatgtc
ttgtccacgccgaacctgctgaccctggacaacgaggctgccagtattttcgtcggccag
accattccgtttgtcaccggcagttacgtgaccgggggcgggggcaccagcaataatccg
tttcaaacggtgcagcgcgaagaagtaggcctcaagctgaatgtgcggccgcagatttcc
gagggcggcacggtcaagctggatatctatcaggaggtcagcagtgtcgatcaacgtgcc
tcgctggaagctggcacggtgaccaacaagcgcgccatcgacaccagcattctgctcgac
gacgggcagatcatggtgctgggcggcctgcttcaggacggctacaaccagagcaacaac
gccgtgccctggttgtcgaacatcccgttgctgggcgtgctgtttcgcaatgaggcacgc
tcgaccagcaaaaccaacctgatggtctttctgcgcccttacatcattcgcgacagcggc
gccgggcgcagtattaccctgaaccgttatgacttcatgcgccgcgcgcagggcaacctt
cagccggagcgcaactgggcgctgccggacacccaggcgccccagttgccttcggcggtc
agggccattccagacctggtcccggcaccgagtcaaatgccacgcgcgacaattcgtgcg
gtgcctgcaccatga

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