Pseudomonas cannabina pv. alisalensis: JGS08_11835
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Entry
JGS08_11835 CDS
T07379
Name
(GenBank) hypothetical protein
KO
K26937
MATE family, multidrug efflux pump
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_11835
Transporters [BR:
pcab02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
JGS08_11835
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
QQN24237
LinkDB
All DBs
Position
2597889..2599250
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AA seq
453 aa
AA seq
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MTEASATFTQGSIARHIAVTASTSAVSLFAVFLVDILTLVYVSMLHDPVLLAAIGIAKVL
MFFNSALATGLIIAATAVLSERIGHHAAGSIPRLTASLLIMVFAVCGLSAAVQLSLAGPI
THWLGAEAATYEAARSFIWLTLPFTAIQAVMQMAAQILRTSGDNSRALKVVLSAAATLAV
ADPFFIFALDLGLNGAGIAFALSACVSASLGVYWVRKRVGLVLTHNLKLLRLHAVRTFRI
ALPAMAANLATPVGLAYLVASLSAFGTSALAAMTVLDRVLQFSYCAFFALPGALAPVLGQ
NIGAQRDDRVRAAIVFTRRLVVGYGLVVWLMLILAGGMIADLYQLEGDARVLFLAFCQFG
GGLWVVIGLDFVAIAVFMTMNRSWWVPVFAWLRATAGTVPFVYAGAHWFGSSGAFPGMLA
GNAVIALISITTASLTAKRFFTSRAQAKCAGAY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccagcgcaacatttacccaaggcagcatagcgcgacacatcgccgtgacc
gccagcaccagcgccgtaagcctgttcgccgtcttcctcgtagacatcctgacactggtc
tacgtctcaatgctccacgatccagtgctgttggccgcaatcggcattgccaaagtactg
atgttcttcaacagcgccctggccaccggcctgatcattgctgccacagccgtactgtca
gaacgtatcggccaccatgccgccgggtccatccccagactcaccgccagcctgctgata
atggtattcgcggtctgcggcctttctgcggcagtgcagctatcattggccgggccaatc
acccactggctcggagccgaagcggccacctacgaagcggcgcgcagcttcatctggctg
acgctgccgttcaccgcgattcaagccgtcatgcagatggccgcacaaattctcaggacc
tccggcgataacagccgggcgttgaaagtcgtcctgtcagccgcagcgaccctggcagtc
gccgacccgttctttatcttcgcactggacctgggtctgaatggcgcgggtatcgcattc
gcgctgtccgcctgcgtttctgcgtcgttgggcgtgtattgggtgcgaaagcgcgtaggc
ctggtgctgacgcacaacctcaaactgttgcgactccatgccgtgcgtaccttcagaatt
gcgcttccggcgatggccgccaacctcgcgaccccggtggggctggcgtaccttgtggcc
tcgttgtcggcattcggcacctcggccctggcggcaatgaccgtgctggacagggtgctg
caattttcctactgcgctttttttgcgttgccgggtgctctggcgccggtgttggggcaa
aatatcggcgcgcagcgagatgaccgggttcgcgcggcgatcgtcttcacgcgaaggctg
gtggttggctacggcctggtggtgtggctgatgttgatattggctggcgggatgatcgcc
gatctctatcagcttgagggcgacgcccgcgtgctgtttcttgctttttgccagttcggc
ggcggtttgtgggtagtgatcggtctggactttgtcgccatcgccgtgttcatgaccatg
aacaggtcatggtgggtgccggttttcgcctggctgcgggcaacagcaggtacagtgcca
ttcgtctatgccggtgctcactggtttggcagcagcggggcgtttcccgggatgcttgcc
ggtaacgcggtgattgcgctgatttcgattaccaccgcatcgctgacggcgaagcgtttt
ttcaccagcagggctcaggccaagtgcgccggggcatattga
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