Pseudomonas cannabina pv. alisalensis: JGS08_11920
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Entry
JGS08_11920 CDS
T07379
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_11920
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
JGS08_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
HTH_20
MarR
NirdL-like_HTH
MarR_2
HTH_IclR
Sigma70_r4
Sigma70_r4_2
HTH_Crp_2
HTH_5
HTH_27
LexA_DNA_bind
TrmB
HTH_23
HTH_31
DUF7343
HTH_Tnp_ISL3
HTH_1
DnaD_N
Rrf2
DUF7342
Motif
Other DBs
NCBI-ProteinID:
QQN24253
LinkDB
All DBs
Position
complement(2616259..2616726)
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AA seq
155 aa
AA seq
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MQPKLSPIDRKILRLLQHDANLSAAEIAERVELSQSPCWRRIHRLQEDGVIERTVALLST
QKLGLSMTVFVEVKLSGHGRRYLAEFEEAIIGHPEVLECYTMAGGMDFMLKVVAQDIASY
ERFLRDHLLQLPHVHEAHSNIAMSTVKRTTELPLE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaaattgagccccattgatcgcaagattcttcgcttgctgcaacacgatgcc
aacctctccgcagcggaaatcgccgagcgggtcgagctgtcgcaatcgccgtgctggagg
cgcattcaccggcttcaggaagacggtgtgatcgagcgcaccgtggccctgctgagtacg
caaaagctcggtctgagcatgacggtgtttgtcgaggtcaagctgtcagggcacgggcgg
cgctatctcgccgaattcgaagaagcaatcatcggccatcccgaggtgctggagtgctac
accatggcgggcggaatggatttcatgctcaaggtggtggcgcaggatatcgccagctac
gaacgctttctgcgtgaccacctgctgcaactgccccacgtgcatgaagcccactccaat
atcgccatgagcacggtcaagcgcaccacggaactgccgctggaatag
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