Pseudomonas cannabina pv. alisalensis: JGS08_12225
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Entry
JGS08_12225 CDS
T07379
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_12225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_12225
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JGS08_12225
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_23
nSTAND1
AAA_16
ABC_ATPase
FtsK_SpoIIIE
NACHT
MMR_HSR1
nSTAND3
DUF87
Mg_chelatase
nSTAND_NTPase5
Dynamin_N
Sigma54_activat
ATP-synt_ab
DUF5906
NB-ARC
AAA_5
AIG1
APS_kinase
IIGP
BrxC-PglY_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QQN24310
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Position
complement(2688042..2689688)
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AA seq
548 aa
AA seq
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MTDAPQLIDIRHLGVAYRFDGQINQAVHNVSFQVAQGETVAIVGESGSGKSTMANAILGL
LPDHATITQGELHIDGQDLSHASEREKRRVRGSLIGLVPQDPMVGLNPTLRIGRQVAEAL
LQARGGRYPTVDAEVLELLQQVGLDKPVLRARQYPHELSGGMRQRVLIAIALAGNPRLII
ADEPTSALDVTVQRKILDHLQRLVSERGISLLIITHDLGVAADRADRVLVMNKGELVEQG
TPEQILINPSHAYTRALIAAAPAFGQRKSSLASRPVLANDTPLLTLGNIGKTYRLPYVKG
EQAEFHALQDVNFKVFPGQTLAIVGESGSGKSTALRIALGLEKPTSGRVLLEGRDVTDLG
WREFRPLRRRIQLVQQNPFAALDPRFTLFESIVEPLVSFGLLKGRELEHAARQLIERVHL
PVAYLDRLPRELSGGQRQRVAIARALALQPDLLLLDEPVSALDVSVQAQILDLLVELQAE
SGMAYVLVSHDLAVVASIAHQVLVLKQGKTIEQGQASDVFERPAAPYTQELIAAIPGRRL
EQQVAAQH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccccgcaactgatcgacatccggcacctgggcgtcgcctatcgtttcgac
gggcagatcaatcaggccgtgcacaacgtttcgtttcaggttgcgcaaggcgaaaccgtg
gcaattgtcggcgagtccggttccggcaagtcgacgatggccaacgcaatcctcggtctg
ctgccggaccacgcaaccattacccagggcgaactgcatattgatggtcaggatctgagc
catgcctccgagcgcgagaaacgccgggttcgcggcagcctgatcggtctggtgccacaa
gacccgatggtcggcctcaacccgaccttgcgtatcggtcggcaggttgccgaagcgctg
ctgcaagcgcgtggcggacgctatccgacagtcgatgccgaggtgctggagctgttgcag
caagtcggtctggacaaaccggtgttgcgcgcccgccagtacccgcacgagctgtccggt
ggcatgcgccagcgtgtattgattgccatcgcactggcaggtaatccgcgcctgatcatc
gccgacgagcctaccagcgcgctggacgtcaccgtgcagcgtaaaatcctcgatcatttg
caacgcctggtcagcgagcgcggcatttccttgttgatcattacccacgaccttggcgtg
gccgccgaccgcgctgaccgggtgctggtcatgaacaagggcgagctggtcgaacaaggc
acgcccgagcagattcttatcaacccgagccatgcctacacgcgtgcgttgatcgccgcc
gctcccgcattcggtcagcgcaaaagctcgctggcatcacgccctgtgctggccaatgac
acgccactgctgacgctgggtaacatcggcaagacctaccgactgccttacgtcaaaggt
gagcaggccgagtttcacgcgttgcaggacgtcaatttcaaagtatttcccggtcagacc
ctggccatcgtcggcgagtccggttcgggcaagagcaccgcactgcgcatcgcgctgggc
ctggagaaaccgacctccggacgagtgctgcttgaagggcgtgacgtcaccgacctgggt
tggcgcgagttcagaccgttgcgacgacgcattcagctggtgcagcaaaacccgttcgca
gcgctcgatccacgcttcacgttattcgaaagtatcgtcgagccgctggtttcgttcggc
ctgctgaaaggccgggaactggaacacgccgcccgccagctcatcgagcgagtgcacctg
ccagtggcctatctggaccggctaccccgtgaactgtcaggcgggcagcgccagcgcgta
gcaatcgccagagcgctggcgctgcagccggatttgctgctgctcgatgagccagtgtcg
gcgctggacgtctcggtacaggcgcagattctcgacctgctggtcgagctgcaagccgaa
tccggaatggcctacgtactggtttctcatgatctggcggtggttgccagcatcgctcat
caggtgctggtgctcaagcagggcaagaccatcgaacaaggccaggccagcgacgttttc
gagcgccctgcagctccttacactcaggaattgattgccgccatccctggccgtcgcctt
gagcagcaggtggcggcacagcactga
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