Pseudomonas cannabina pv. alisalensis: JGS08_12330
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Entry
JGS08_12330 CDS
T07379
Name
(GenBank) ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_12330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_12330
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
JGS08_12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_16
AAA_22
AAA_29
TniB
ATP-synt_ab
NACHT
nSTAND1
nSTAND3
DUF87
NTPase_1
NB-ARC
AAA_7
NPHP3_N
RsgA_GTPase
Mg_chelatase
AAA_5
AIG1
Sigma54_activat
AAA_30
SLFN-g3_helicase
ATPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QQN24328
LinkDB
All DBs
Position
complement(2716126..2717703)
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AA seq
525 aa
AA seq
DB search
MSENLIEILQLSVAFNGQKVVSDLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGT
QTTGSITYRGQELVGADDRTLRELRGNRIAMIFQEPMTSLNPLHSVARQIGETLLLHRGM
SGREAHKRIVELLELVGIQQPEKRLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPTT
ALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVMRAGEIVEQADCKSLF
KAPQHPYSRLLLDAEPAGEPLPRDSRETVLQVDNLKVWFSLTGGLLRRHQEYLKAVDDIS
LSIERGKTLGIVGESGSGKSTLGQAILRLVESQGSIRFRGQALDSLSQKQMRPWRKEMQV
VFQDPYGSLSPRMSVAQIISEGLEVHSPLSLEQRDAEVIRALQEVGIDPQSRHRYPHEFS
GGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRDLQQKHGLTYLFISHDLA
VVKALAHDVIVVKDGKVVERGASHEVFDAPQHPYTQELLAAAHPG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaatctgatcgaaattctccagttgagcgtcgccttcaacggccagaaggtg
gtcagcgacctgagcctggatgtccggcgcggagagtgcctggcactggtcggcgaatcc
gggtcgggtaaatcggtcaccgcgcattcgattttgcaactgttgcctcgcagcggcacg
cagaccactggcagcatcacctaccgcgggcaagaactggtgggcgccgacgaccgcacc
ctgcgcgagctgcgtggcaaccggattgcgatgatcttccaggagccgatgacctcgctg
aacccgttgcacagcgtggctcggcaaatcggcgaaaccctgttgctgcatcgcggcatg
agcggtcgtgaagcgcacaagcgtattgtcgagctgttggaactggtcggcattcaacag
cctgaaaagcgcctcaaagcttacccgcatcagctgtctggcggccagcgtcagcgggtg
atgatcgccatggcgctggcgtgcgagcccgagctgctgattgccgacgagccgaccacg
gcgctggacgtgactgtgcaacgcaagattctgctgctgctcaaagagctgcagcagcgc
ctgaacatgtcactgctgctgatcagccatgatttgaacctggtgcacagcgtggcgcag
cgggtgtgcgtgatgcgtgctggcgagattgtcgagcaggccgactgcaagtcgctgttc
aaagcgccgcagcacccttacagccgcctgctgctggatgccgagccagcgggagaaccg
ctgcctcgcgacagccgggaaaccgtgctgcaggtcgataacctgaaagtctggttctcg
ctgaccggcggcctgttgcgacgacatcaggaatacctgaaagcagtggacgacatcagc
ctgagcatcgagcgcggcaagacgctgggcatcgtcggcgagtcgggctccggcaaatcg
acactcggccaggcgatcctgcgcctcgtggaatcgcagggcagcatccgctttcgcggg
caggcgctggacagcttgagccagaaacagatgcgcccgtggcgcaaagagatgcaagtg
gtctttcaggacccttacggcagcctcagcccacgtatgtccgtggcgcagatcatcagc
gaagggctggaggtgcacagcccgctctcgctcgagcaacgcgacgccgaggtgattcga
gcgttgcaggaggtgggtatcgatccgcaaagtcgccatcgttacccgcatgagttttcc
ggtggccaacgtcagcgtatcgccattgcccgtgcactggtgctgaaaccggccttgatc
ctgctcgacgagccgacctcggcactggaccgcaccgtgcagaaacaggtggtcgccctg
ctccgcgatctccagcaaaaacatggcctgacctatctgttcatcagccacgacctggcc
gtggtcaaagccctggcccatgacgtgatcgtggtcaaggacggcaaagtggtcgaacgc
ggtgccagccacgaggtgttcgatgcaccgcagcatccgtatacgcaggagttgctggct
gcggcgcatccgggttga
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