Pseudomonas cannabina pv. alisalensis: JGS08_12460
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Entry
JGS08_12460 CDS
T07379
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JGS08_12460 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_12460 (xylF)
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
JGS08_12460 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
RHH_8
Adhesin_P1_N
Motif
Other DBs
NCBI-ProteinID:
QQN24351
LinkDB
All DBs
Position
complement(2745382..2746383)
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AA seq
333 aa
AA seq
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MNTLKRTLLASALALLSLPVMADSAHPKIGFSIDDLRLERWARDRDYFVAAAEKLDAKVF
VQSADANEQKQISQIENLISRGMDVIVIVPFNATVLTNAIAEAKKANIKVVSYDRLILNA
DVDAYISFDNEKVGEMQASGVLAAAPKGNYFLLGGAPTDNNAKILREGQMKVLQPAIDKG
DIKIVGQQWVKEWNPIEALSIVENALTRNDNKIAGIVASNDATAGGAIQALAAQKLAGKV
PISGQDADLAAIKRVKDGTQTMTVYKPLKLIAIEAAKLSVQLARGEKPAFSSQYDNGSKK
VDTILLAPTPLTKDNIDLLVTDGFYTQAQIDGK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctgaaacgcacgctgctggccagtgcactggcacttctgtccctgccggtc
atggccgattctgcccacccgaagatcggcttttcgattgatgacctgcgcctggagcgc
tgggcaagagaccgggattacttcgttgcagcggccgaaaagctggacgccaaggtcttt
gtgcaatcagctgatgccaacgagcaaaagcagatttcgcagatcgagaacctgatttcc
cgaggcatggatgtgattgtcatcgtgccgttcaacgccacggtattgaccaacgccatt
gccgaagccaagaaagccaacatcaaggtcgtgtcttatgaccggctgattctgaacgct
gacgtcgacgcctacatctctttcgataacgaaaaagtcggcgaaatgcaggccagcggt
gtgctcgccgccgcgcccaagggcaattacttcctgctcggtggcgcgccgacagacaac
aacgcgaagattttgcgcgaaggtcagatgaaagtgctccagccggccatcgacaagggc
gacatcaagattgtcgggcaacagtgggtgaaggaatggaaccccatcgaggcgctgagc
attgtggaaaacgccctgacccgcaatgacaacaagattgctggcatcgtcgcctccaat
gacgcgacggccggaggggccatacaagcgctggccgcgcaaaagctggcgggcaaggtg
cccatctcggggcaggacgctgacctggcggcgatcaagcgagtaaaagatggcacgcag
accatgaccgtttacaaaccattgaaactgattgccatcgaggccgccaaactctcggta
cagctggcacgcggcgaaaagccggccttcagttcgcagtacgacaacggtagcaaaaag
gtcgacaccattctgctggccccgacgccattgaccaaagacaacatcgacctgctggtc
accgacggcttttacactcaggcacagattgacgggaaatga
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