Pseudomonas cannabina pv. alisalensis: JGS08_12470
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Entry
JGS08_12470 CDS
T07379
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_12470
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LacI family
JGS08_12470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_18
HTH_AraC
Peripla_BP_4
Peripla_BP_1
HTH_23
Sigma70_r4_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QQN24353
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Position
2748005..2749195
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AA seq
396 aa
AA seq
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MKTVPPVHRIALLFNGSKIYDRGIISGIGNYLSSTRVSWDLFLEEDFLCRLKGIERWQGD
GIIADFDDPLIGEALAGIRLPVVAVGGSYQDARAYPNGIPYVATDNHALIEAAYQHLIEA
GLTRFACFSLPEAQANRWAQERETAFRRLLQRDGLQVEIYRGMGTSAPLWDSAVEQQIAW
LHSLPKPVGIIAVTDARARQLLQACLTAGIAVPEQVALIGIDNDPLTRTLTRVPLSSVIQ
GTETMGRTAARLLHQMLHGMPSTGTQILIPPDAVNVQASSLHQPLGNPYVMQAMLFIRQY
ACQGIKTAQVAAYVGVSRSSLESHFRRARGCSVHDEILRFKLAAAANGLEKTDSAIAEIA
RDCGFKSAQYLHTVFRREFGCTPREYQVKGSVAEHH
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgtacctcctgtgcaccgcatcgcgctgttattcaatggcagcaaaatctac
gatcgcggcattatcagtggcattggcaattacctcagcagcactcgcgtatcctgggat
ctgttcctcgaagaagattttctctgtcgcctgaaaggcatcgagcgctggcagggcgac
ggaatcattgccgacttcgacgacccgttgatcggcgaggcactggccggcatcagattg
ccggtcgtggcggtcggtggctcttatcaggatgcgcgtgcctacccgaacggcattccg
tatgtcgccaccgacaatcacgcgctgatcgaggcggcttaccaacacttgatcgaagcc
ggactgacacggtttgcctgcttcagtctgcctgaggcgcaagccaatcgctgggcgcag
gagcgggagacagcctttcgccggttgctgcagcgcgatgggctgcaggtcgagatttac
cgtggcatgggcaccagcgctccgctttgggacagtgccgtcgaacagcagatcgcctgg
ctgcacagcctgcctaaacccgtcggcatcatcgccgtgaccgacgcgcgcgcccggcaa
ttgctacaggcctgcctgaccgccgggattgccgtgcccgagcaagtggcactgatcggc
atcgataacgacccgctgacccgaaccctcacacgcgtacccctgagttcggtgattcaa
ggcaccgagaccatgggcagaaccgccgcgcgcctgcttcaccagatgctgcacggtatg
ccgtccaccggcacacagatcctgattccaccggatgcggttaacgtgcaggcttcaagc
ttgcatcaaccattgggtaatccgtacgtgatgcaagccatgctgttcatccgccagtac
gcctgtcagggcatcaagacagcgcaagtcgccgcgtatgtgggcgtatcgcgctcatca
ctggaatcacactttcgcagggcgcgcggctgcagcgtgcatgacgagatcctgcgcttc
aaactggccgctgccgccaatggcctggaaaaaaccgactcggcgattgcagagatcgcc
cgcgattgtggtttcaaatcggcgcagtacctgcacaccgtgtttcgccgtgagtttggg
tgcacgccgagggagtatcaggtgaaggggagtgtggcggagcaccattag
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