Pseudomonas cannabina pv. alisalensis: JGS08_12900
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Entry
JGS08_12900 CDS
T07379
Name
(GenBank) PAS domain-containing protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Gene cluster
GFIT
Motif
Pfam:
PAS_9
Response_reg
HATPase_c
PAS_3
PAS
HisKA
PAS_8
PAS_4
Phage_TAC_17
SPOB_a
MRP-S24
EzrA
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
QQN24426
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Position
2842055..2843659
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AA seq
534 aa
AA seq
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MSENKARVDNDATGNIEHQGRDIFFAAVETTRMPMIVTDPNRPDNPIIFSNRAFLEMTGY
SSDEIIGTNCRFLQGPETDPSVVQSLRDAIRERTDISAEILNYRKDGSSFWNALFISPVY
NDAGSLIYFFASQLDISRRKDAEEALRQAQKMEALGQLTGGIAHDFNNLLQVMGGYIDLI
GSAAEKPNIDVQRVQRSVHHAKSAVERASTLTKQLLAFARKQKLQGRVLNLNGLVSTTES
LLERTFGPEVLIETDLEPALMNCRIDPTQAEVALLNIFINARDALIGRPNPKVCIETRNL
VVDELINVSYDGLLPGRYVSIAVTDNGIGMPASIRDRVMDPFFTTKEEGKGSGLGLSMVY
GFAKQSGGAARIYTEEGVGTTLRLYFPVDEAGLTHTESPQATERHRASSERILIVEDRAD
VAELAKMVLDDYGYVSDIVLNAREALKKFESGSHYDLLFTDLIMPGGMNGVMLAREVKRR
YPKVKVLLTTGYAESSIERTDLGGSEFEVISKPCMPHDLARKVRQVLDGPNGIA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaaaataaagcccgtgtcgacaatgatgcaacagggaacattgagcatcagggc
cgggatatcttcttcgcagcggtagaaacgacgcgcatgccgatgatcgtgaccgacccc
aatcgtccggataaccccatcattttttccaaccgtgcctttctggaaatgaccggttat
tcgtctgacgaaatcatcggcacaaactgccggtttctgcagggcccggaaactgacccg
tcagtggtgcaatcgcttcgtgatgcgattcgggagcgcacggacatctccgcagaaatc
ctcaattaccgtaaggacggttcgtcgttctggaacgcgttgtttatttctccggtgtat
aacgacgcggggagtctgatctacttttttgcctcgcagctggatatcagccgccgcaaa
gacgccgaggaagcattgcgccaggctcagaagatggaagcgttggggcagctcactgga
ggcatcgctcacgacttcaataacctgcttcaggttatgggcggttatatcgatctgatt
ggcagcgccgcagagaaaccgaatattgatgtgcagcgcgtgcagcgcagtgttcatcac
gccaaatctgcggtggagcgtgccagcaccttgaccaagcaattgctggcgttcgctcgc
aaacaaaaactgcagggcagggtgttgaacctcaacggtctggtttcgacgaccgaatca
ttgctcgaacgcacgttcgggccggaagtcctgatcgagaccgaccttgagccggcgctc
atgaactgccgcatcgaccctacccaggcggaagtcgccctgctgaatatcttcatcaac
gcccgtgatgcactgattggcagacccaaccccaaggtatgcatcgagacgcgcaatctg
gtggtggatgaactgatcaatgtgtcttatgacggcttgctgccgggacgttatgtcagc
attgcggtaaccgacaacggtatcggcatgcccgccagcattcgtgatcgggtcatggac
ccgttcttcaccaccaaggaagagggcaaaggctccgggctgggcctgtctatggtgtac
ggcttcgccaagcagtcgggtggtgccgcgcgtatttacactgaagaaggtgtcgggacg
acgctgcgtctgtattttccggtcgatgaagccgggttgacccataccgagtcgccacag
gcaacagaaaggcatcgcgctagcagcgaacgcattctcattgtggaagatcgcgccgac
gtcgccgagctggcaaagatggtgctggacgactacggctatgtgtccgatatcgtgctg
aatgcgcgtgaggcactgaagaagttcgagtccggcagccattatgacttgctgtttacc
gacttgatcatgcccggcgggatgaacggagtgatgctggcccgtgaagtcaaacgccgt
tatccaaaggtgaaggtgctgttgaccaccggttatgcagaaagctcgattgaacgaacc
gacctcggaggttcggagttcgaagtgatctccaaaccgtgtatgccccacgatctcgcc
cggaaagttcgccaggtgctggacgggccgaacggtatcgcctga
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