Pseudomonas cannabina pv. alisalensis: JGS08_13360
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Entry
JGS08_13360 CDS
T07379
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_13360
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_13360
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QQN24492
LinkDB
All DBs
Position
complement(2956251..2958653)
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AA seq
800 aa
AA seq
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MPAVSPYRLRPLLRFSLLLTLSSSPLFVSTSWADTASRRAYEVPAGTLSAALTRFAGQAG
VNLSVDPSLVNGRNSAGLSGDFAVEEGFARLLQGSGLQLVSVGDQAYTLIPAVQSSSMQL
APTSIVGDGGSTDGQEYAGGQVARKGSQGMLGSRDFMETPFSMTTYTKDAVKNQQARTLG
DLIASDPSVRSTNPAGGRYEQFTIRGFSLFNSDVSYNGLYGILPTYTIDMEMAERVDILK
GPSQMINGISPRGSVGGGINVVPKRATDKPITEFTTSYASKGQVGAAVDVARRFGEDDKF
GIRFNGVKQSGDTEWDHQSVDRDMAVLGLDFRGERLRLSTDIGHTERDTDAPQERVQVGA
NAKVPNANDVRDNYAQAWSKARTRDTFGAVNAEYDVNDSVMLYGGVGARKSNHDFLRHAV
SVTNNAGDFSVQPRDFTRDENVRTANAGVRNWFHTGPVSHEVNLAASYFYMDFENGGARY
AASPSNLYDPIETPTPRNPTRQDAEVYTENRFTGLALTDTMGFFDDRLLLTLGARWQRVK
VDDWTDNVKGDTSYDEEKVSPSGGILYKVTEDFSVYANYMEGLSQGKIAPSTSVNEDEIF
PPFVSRQVEVGAKYDLGSYAFTASVFRIKQPAYETNVTSRVFGPNGKRQNDGVELTMFGE
PLKGFRLLGGVMYIDSELTQTVNGAFDGNRAPATPKYNVNLGAEWDVPQVNGLTLTGRGI
YTSSQYLDQANSKSIDSSERFDVGARYAFKVDQKDITLRANIENVMDKRYWASAGASDDS
EPGLTLSTPRTYLLSATVGF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtttctccttaccgtttgcgtccgctgttgcgtttcagtctgttgctgacc
ctgagctccagtccgctgttcgtgtcgaccagttgggccgacaccgcgagcaggcgcgcc
tatgaagtaccggctggcaccctgagtgccgcactgacccgcttcgccgggcaggccggg
gtcaacctgtccgtcgacccctcgttggtgaacggacgcaacagcgccgggctgtcgggc
gacttcgcagtcgaagaaggctttgcgcggctgctgcagggcagcggtctgcaactggtt
tcggttggtgatcaggcctatacgctgatccctgccgtgcagagctcaagcatgcagttg
gcgccgacttcgattgtcggtgacggcggttcgactgacggtcaggaatacgcaggtggt
caggtggcacgcaaaggctcgcaagggatgcttggctcgcgggatttcatggaaaccccg
ttcagcatgaccacctacaccaaggacgccgtgaaaaaccagcaggcccggacgctgggc
gacctgatcgccagcgacccctcggtgcgctctaccaacccggcgggcgggcgttacgaa
cagttcaccatccgtggtttcagcctgttcaacagcgacgtttcctacaacggcctttac
ggcattctgcccacctacacgatcgacatggaaatggccgagcgggtggacatcctcaaa
ggcccgagccagatgatcaatggcatttcgccgcgtggcagtgtcggcggcgggatcaac
gtggtgccgaaacgggcgaccgacaagcccatcaccgaattcaccaccagctatgcctcc
aaagggcaggtcggtgcggcggtggacgtggctcgccggttcggtgaggacgacaagttc
ggtattcgcttcaacggcgtgaagcagtctggcgacaccgaatgggatcatcagagcgtt
gatcgtgacatggccgtgctgggcctggacttccgcggcgagcgcctgcgcctgtcgacc
gatatcggccacaccgaacgcgacaccgatgccccgcaggaacgcgtgcaggtcggtgcc
aatgccaaagtgccgaacgccaacgatgtgcgcgacaactacgcgcaggcctggagcaag
gcgcgcacccgggacaccttcggtgcggtgaatgccgaatacgacgtcaatgactcggtc
atgctctacggcggtgtcggcgctcgtaaaagcaaccatgatttcctgcgccatgcggtg
tcggtgaccaacaatgccggcgacttcagcgtccagccgcgcgacttcacccgtgacgaa
aacgtccgcacggccaacgccggggtgcgcaactggttccataccggaccggtcagccac
gaggtcaatctggccgccagctatttctacatggacttcgaaaacggcggcgcgcgctat
gcggcctcgcccagcaacctgtacgacccgatcgagacgccgacaccccgtaacccgact
cgccaagacgcggaggtttataccgagaatcgcttcaccggcctggcgctgaccgacacc
atgggcttcttcgatgaccgcctattgttgacactcggcgcccgctggcagcgggtcaag
gttgatgactggaccgacaacgtcaaaggcgacacgtcgtacgacgaggaaaaggtctcg
ccgtcaggcggcattctgtacaaggtcaccgaagacttttcggtgtacgccaactacatg
gaaggcctgagccagggcaaaatcgcgccgtcgacctcggtcaacgaagacgagattttc
ccgccgtttgtcagccgtcaggttgaagtcggggccaagtatgacctgggatcgtatgcg
ttcactgccagcgtgttccggatcaaacaaccggcttacgagaccaatgtcacctcgcgg
gtcttcggaccgaacggcaagcggcagaacgacggtgtcgagctgaccatgtttggcgaa
ccgctcaagggcttccgtctcctgggcggggtgatgtacatcgacagcgagctgacgcag
accgtcaacggcgcgttcgatggcaaccgtgcaccggccacgcccaaatacaatgtcaac
ctcggtgccgaatgggatgtgccgcaggtcaacggcctgaccctgaccgggcggggcatc
tacaccagttcgcagtacctggatcaagccaacagtaaaagcatcgattcttccgaacgt
ttcgacgtaggtgcgcgctatgccttcaaggtcgatcagaaggacatcacgctgcgggcc
aacatcgagaatgtgatggacaagcgttactgggcttccgccggagcctcggatgacagc
gagcccggcctgacgctgtcgaccccgagaacctatctgctgtcagcgaccgtcggtttc
tga
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