Pseudomonas cannabina pv. alisalensis: JGS08_13405
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Entry
JGS08_13405 CDS
T07379
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20330
LuxR family transcriptional regulator, activator of tox operons
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_13405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_13405
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
JGS08_13405
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_10
Sigma70_r4
Fe_dep_repress
HTH_29
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QQN24501
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Position
2993625..2994398
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AA seq
257 aa
AA seq
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MNTAQHFEYSDDPRFYLQLASLVSSIGCTTFAGRMLQLVHSLVPIHGLDLSELTLDLREG
SVSRIDLLGGAGLQYANPAADSPGHPLLSSILHMQDPLLIQLKPPSSMQHPQRNMHQCSL
VSSHGELRRIICVYRLTTLRAFSLSELSLLKSLSDTLLPLVEQHAQSLAQASLRGARVEP
EPGSLDQAFSGRLAQDAITLSAREQEVCLGLLTGGTVAELAQRLNVKNSSVETYLKRATA
KLGVSGRHGLARWMAGD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcgcaacactttgaatacagcgacgatccgcgcttttatctgcaactggcg
agcctggtttcgagcatcggttgcaccacatttgccgggcgcatgctgcagttggttcac
tcgttggtgccgattcacgggctcgacctcagtgaactgacgctggaccttcgcgagggc
agcgtcagccgtatcgacctgcttggcggcgccggtttgcagtacgccaatccagctgcg
gattcacccggccacccgctgctgtcgagcattctgcacatgcaggacccgctgctgatt
cagctcaagccgccttcgagcatgcaacacccgcaacgcaatatgcatcagtgcagtctg
gtttccagtcacggcgaattgcgtcgaatcatctgtgtttaccggttgaccaccctgcgg
gcgttttctctgagcgagctgtcattgctcaagagtctgtccgatacattgttgccgctg
gttgaacaacacgcccaaagccttgctcaagccagccttcgcggagcgcgagtcgagccg
gagccaggttctctggatcaagccttcagtggcagactggcgcaggacgccattaccctg
tccgcacgcgagcaggaagtttgcctgggcttgctgacaggcggcaccgtagccgaactg
gcgcaacggctgaacgtcaagaacagttccgtggaaacctacttgaagcgcgctacggcg
aagctcggggtcagcggcagacacggtctggcgcgctggatggcgggggattga
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