Pseudomonas cannabina pv. alisalensis: JGS08_13520
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Entry
JGS08_13520 CDS
T07379
Name
(GenBank) type 2 isopentenyl-diphosphate Delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00900
Terpenoid backbone biosynthesis
pcab01100
Metabolic pathways
pcab01110
Biosynthesis of secondary metabolites
Module
pcab_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
pcab_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JGS08_13520
Enzymes [BR:
pcab01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
JGS08_13520
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Gene cluster
GFIT
Motif
Pfam:
FMN_dh
Glu_synthase
IMPDH
DHO_dh
PcrB
Motif
Other DBs
NCBI-ProteinID:
QQN24523
LinkDB
All DBs
Position
complement(3017719..3018774)
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AA seq
351 aa
AA seq
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MDNSDLGRRKDDHLNIVLEQRGAGSGAVTGLDAVQFEHCALPELNLDDIDLRSALLHMPL
RAPLLISSMTGGAERSTVINRNLAIAAQELGMAMGVGSQRVGLRSPNDQGLTRELRRLAP
GVPLLSNIGAAQLLEADGLDLARRAVDALQADALIIHLNPLQEAVQAEGDRQWQGVLNTI
ARTVESVGVPVIVKEVGAGLSAEVASLLAGVGVRVIDVAGKGGTSWAAVEAGRATSAADR
EVAMAFADWGIPTATSLINVRKALPDITLIASGGIRNGVDAAKAIRLGADLVGQAAGVLN
EAMLSSSAVIEHFEIIIRQLRIACFCTASADLAALRKARLSLPLAINGSPP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggataacagcgaccttggtcgacgcaaggatgatcatctgaacatcgtcctcgaacag
cgcggcgcaggttcgggcgcagtgacaggactggatgccgtgcagttcgagcactgtgcg
ctgccagaactgaacctggatgacatcgacttgcgcagcgccttgctgcacatgccattg
cgtgcgccactgctgatcagttcgatgaccggcggcgccgagcgctcgacagtgatcaac
cgcaatctggccatcgcggcgcaggaactggggatggccatgggcgtcggctcgcagcgt
gtgggcttgcgcagcccgaatgatcagggcctgacgcgcgagttgcggcgtctggcaccg
ggcgtgcccttgctgagcaatatcggcgctgcacaattgctggaagctgacggcctggat
ctggcgaggcgcgccgtcgatgcgctacaggccgatgcgctgatcatccacctcaacccg
ttgcaagaagccgtgcaggctgaaggcgaccggcaatggcagggtgtactgaacacgatt
gcccgtaccgtcgagagcgtcggcgtgccggtgatcgtcaaggaggttggggcagggctg
tctgccgaggtggcgtcgttactcgccggtgtcggcgtccgggtcattgatgtggctggc
aagggcggcaccagttgggcagcggtcgaagccgggcgggccaccagtgctgccgaccgt
gaggtggcgatggccttcgctgactggggcattcccaccgccaccagcctgatcaacgtg
cgcaaggctctgcccgatatcacgctgatcgcgtcgggcggcattcgcaatggcgttgat
gcggccaaagccattcgccttggcgccgatctggtaggacaagccgcaggtgtgctcaac
gaagcgatgttgtccagcagtgcagtgatcgaacattttgaaataataattcgccaactg
cgcatcgcctgcttctgcacggcatccgcagaccttgcggcgctgcgcaaggcgcggctc
agcctcccgcttgcgatcaatggttcaccgccatga
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