Pseudomonas cannabina pv. alisalensis: JGS08_13550
Help
Entry
JGS08_13550 CDS
T07379
Name
(GenBank) FAD-binding oxidoreductase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab00310
Lysine degradation
pcab01100
Metabolic pathways
pcab01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
JGS08_13550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_10
Fer4_20
BBE
Motif
Other DBs
NCBI-ProteinID:
QQN24527
LinkDB
All DBs
Position
complement(3023732..3026779)
Genome browser
AA seq
1015 aa
AA seq
DB search
MIALLKPTSEQIGHYDRFLDALVEGGFRGEIARDHGSRTVLATDNSIYQRLPQAAVFPMD
SHDVAIVARLAARPEHRQVVLTPRGGGTGTNGQSLTDGVVVDLSRHMNNILEINVEERWV
RVQTGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLEL
STVLLGGSYVHSQAMGPVQLASEQARVDRAGDVYRCAQQIADTQAQLIKDVFPPLNRCLT
GYDLAHLREEDGRFNLNSVLCGSEGSLGFIVEARLNVLPIPKHSILVNVRYAGFMDALRD
AKALMAHKPLSIETVDSKVLMLAMQDIVWHGVAEYFPQDPATPTLGINLIEFSGDELSDV
EQRVHAFVSHLQADTSVVRLGHTLAIGSAAVNRVYAMRKRSVGLLGNVQGEARPQPFVED
TAVPPENLADYIQEFRALLDSYGLQYGMFGHVDAGVLHVRPILDMKDPAQAALIRPISDA
VAALTKRYGGLLWGEHGKGLRSQYVPEYFGELYPALQALKAACDPFNQLNPGKIATPASV
PDARLTLVDEVTLRGDLDRTIDERVWKSYDSALHCNGNGACYNYDSDDAMCPSWKATRDR
VHSPKGRASLVREWLRLQGEQNVDVLTASARARTANVLKSLAERTVNSVARVAGQKDFSH
EVYDAMAGCLACKSCAGQCPVKVNVPEFRSRFLELYHSRYLRPFKDYLIGSLEFSIPHLA
RFPRLYNAVMAAKPVRYLLEHVAGMVDSPLLSLTDFRAACARWNVGIATPQRLAALTGQE
RKRTVVLVQDAFTRYFETPLAADWLELISRLGYQVYLAPFAPNGKPLQVQGFLTAFEKAA
RFNSQSLGKLAGFGIPLIGLDPAMTLVYRQEYSKTLGSENVPSVMLPQEWLATAPEAQRD
VVAEETYYFLPHCTEKTNEPGSVGLWQKAFARAGLKLEVLASGCCGMSGTYGHETRNAKT
SDIIYSQSWQPLVARHGDEGRLLADGYSCRSQVKRQDGKVVQHPLQVLLERVRAL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgctgctgaaaccgacctccgaacagatcggccattacgatcgttttctcgat
gcgctggtcgagggtggctttcgcggcgaaatcgccagggatcacggctctcgcacagtg
ctggccaccgacaactccatctatcagcgcttgccgcaggcggcggtgttcccgatggac
agccatgatgtagcgatcgtcgcccgcctggccgcgcggcccgaacatcggcaggtggta
ctgaccccgcgtggtggcggcaccggcactaacgggcagtcgctgaccgatggcgtggtg
gtcgatctgtcgcggcacatgaacaacatccttgaaatcaacgtcgaggagcgttgggtg
cgggtgcagactggcgtggtcaaggaccagctcaacgcagccttgaagccgcacgggctg
tttttcgcgccggagttatcaacctccaaccgcgccacggtcggcggcatgatcaatacc
gacgccagcgggcagggcagttgcacctacggcaagacccgcgaccatgtgctggagctg
tcgaccgtgttgctcggcggctcttacgtccacagccaggcgatgggcccggtgcaactg
gccagtgagcaggcgcgtgttgatcgggctggcgatgtgtaccgctgcgcacagcagatt
gccgacacccaggcgcagctgatcaaggacgtgtttccgccactgaatcgctgcctgacc
ggttacgatctggcgcacctgcgcgaggaagacgggcgcttcaacctgaacagcgtgctg
tgcggctccgaaggctcgctgggttttattgtcgaagcccggctcaacgtgctgccgatt
cccaagcactcgattctggtcaacgtgcgttacgccggcttcatggatgccttgcgcgac
gccaaggctttaatggcgcacaagccgctgtcgattgaaaccgtggattccaaagtgctg
atgctggcgatgcaggacatcgtctggcatggcgtggccgagtactttccgcaggacccg
gcgacaccgacgctgggcatcaacctgatcgagttcagcggcgatgagttgagcgacgtg
gagcagcgcgtgcatgccttcgtcagccacttgcaggcagacacgtcggtggtgcgcctg
ggtcatacgctggcaatcggcagcgcggcggtgaatcgggtctacgccatgcgtaagcgc
tcggtaggattgctcggtaacgtacaaggcgaagcgcggccgcagccatttgtggaagac
accgcagtccccccggaaaatctcgctgactatattcaggagttccgtgcgctgctggac
agctacggcctgcaatacggcatgttcggccacgtggacgcgggcgtgttgcatgtgcga
ccgattctggacatgaaagacccggcgcaggcagcgctgattcggccaatttccgatgcc
gtcgcggcgctgaccaagcgttatggcggtttgctgtggggcgagcacggcaagggcctg
cgctcgcaatacgtgcccgagtatttcggcgagctgtatccggccttgcaggcgctcaag
gctgcctgcgacccgttcaaccagctcaaccccggcaagatcgccacaccggcgagcgtg
cccgacgcgcgtctgactctggtggatgaagtgacgctgcgtggcgatctggatcgcacg
atcgacgagcgggtctggaagagttatgacagcgcgctgcattgcaacggcaatggtgcc
tgttacaactacgacagcgacgacgccatgtgcccgtcgtggaaagccacccgcgaccgt
gttcactctcccaaggggcgcgcgtcgctggtacgtgagtggctacgcctgcaaggcgag
cagaatgtcgatgtgctgaccgccagcgccagggcgcgcacggccaatgtgctgaaaagc
ctggccgagcgaaccgtcaacagcgtggccagagtggcggggcagaaggatttctctcac
gaagtctacgacgccatggccggttgcctggcctgcaagtcctgcgccgggcagtgcccg
gtgaaggtcaacgtgcctgagttcaggtcgcgttttctggagctgtaccacagccgctac
ctgcgtccgttcaaggattacctgatcggctcgctggaattcagcattccgcatctggcg
cgctttcccaggttgtacaacgcggtcatggccgccaaaccggtgcgttacctgcttgag
cacgtggccggaatggtcgacagcccgttgctgagcctgacggactttcgtgctgcctgc
gcgcgctggaatgtgggcattgccacgccacagcggctggccgcgctgaccgggcaggag
cgcaagcgcacggtggtgctggtgcaggacgcgtttacccgctatttcgaaacgccgctg
gccgcagactggctggaactgatttcgcgcctgggctatcaggtctacctcgcgccgttt
gcccccaatggcaagccgttgcaggtgcagggcttcctcactgcgttcgagaaggctgcc
cgcttcaacagccagtcgcttggcaagctggccgggtttggcatcccgctgatcgggctc
gatccggccatgaccctggtctatcgtcaggaatacagcaagacgctgggcagcgagaac
gtaccctccgtcatgctgccgcaggagtggctggcgaccgcgcctgaggcgcagcgtgac
gtggtggcggaggaaacgtattacttcttgccgcactgcaccgaaaaaaccaacgagccg
ggcagcgtcggcctctggcagaaagccttcgcccgcgccggcctcaaactggaagtgctg
gccagcggctgctgcggtatgtcaggcacctatgggcacgagacccgaaacgcgaaaacc
agcgacatcatctacagccagtcctggcaaccgctggtggcgcgccatggcgacgaaggc
cgactgctcgccgacggctactcatgccgcagccaggtcaaacgccaggatggcaaggtc
gtgcagcatccgttgcaagtgctgctggaacgggtgagggcgctgtaa
DBGET
integrated database retrieval system
