Pseudomonas cannabina pv. alisalensis: JGS08_13770
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Entry
JGS08_13770 CDS
T07379
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
DUF3575
DUF3954
Motif
Other DBs
NCBI-ProteinID:
QQN19732
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All DBs
Position
3072799..3075582
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AA seq
927 aa
AA seq
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MSNRVISLRYTHKVLPFLILIIVPPHVEGACNPGAQNENGVSICDSGTSAAFTGLTGNHI
LIFPAGGTGIVAGNIIYGQGVDSIEMQSGRIQGNITQAAGVDRFILTAGEISGDLNQGND
PDDFVMSGGTLGSLAQGDGLDTFLMSGGTINRAFEDGDRAVMTGGTIGRVDMKLDNNVFE
MSGGSIINNLVTGFGRDTITLSGGSIGGAVSVSGGDDQITISGGEIRGGIRASFGNDSFN
WLNGGYVRTSVAMADGNDTARLYNLSEYFLSASSLLDGGPGDDVLTFDNTHSARPERYAN
WETVSLENSTQLDLAGKLILGDSVSNTGVLNVGAGSTLTSVSSGSVVPFNATSRATLNNA
GTLDLSGSPLTNTLLIRGNYTGQDGRLLLRSVLGDETSPSDRLVVAQGHIGGSTSMTVSN
LGGPGALTWGNGIEVVEASEGATSDSAAFRLQNSLSVGAYQYYLFKGGATAGSENSWYLR
SAVISPAEPAPVIPPEPAPVTPPAPEPVPEPNPGPEPQPEPEPEPEPEPQPEPQPEPAPT
PIPIPIPTPTPEPTPTPAPSPTPVPGPTPTPTPIVPPANPPPQPPALALPVPALGTPPLP
APVPGAPPIILYRPEVATYAAVSPAAAALASSSLGTFHERQGDQRLLTQSGVTPAGWARV
FGSDVRQQWAGDVSPALDASSKGYQIGHDLYAWQMANEWSQRVGLFVAHNRLDGRVKGFA
GGFEERRTGRMKLTGDSLGAYWTLIAPSGGYVDAVAMGTRLDGYSRSDRGLRIDTEGHAL
SLSLETGYPLPLSSRWVVEPQAQIIHQRIRLDDQHDGISRIGFDNQRHTTLRIGTRFKGS
YQIRKMPIEPYLRANLWRNADGHDAVTFDRVQQIRTEHRSTTASLGGGMAAKMSSATSLY
WEANYSRDLHNHDRNGVSASLGARLAW
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccgtgttatttctcttcgctacacccataaagtcctgccgttcctcatattg
atcatcgtgcctccccatgttgaaggcgcatgcaaccctggcgctcagaacgaaaacggc
gtttcgatctgcgacagcggtaccagcgctgcctttaccggcctgaccggtaaccacata
ctgatattcccggccggaggaaccggcattgtcgcaggcaacatcatctatggacagggg
gtcgacagcatcgaaatgcagtccggccggattcagggcaacatcacccaggccgctggt
gtcgaccggttcatcctgaccgcaggtgaaatcagtggcgacctcaatcaaggcaatgac
ccggacgacttcgtcatgagtggcggtacgctgggctcgttggcacagggtgacgggctg
gacactttcctcatgagcggcggcacgatcaaccgggctttcgaagacggcgaccgcgcg
gtgatgaccggcggcaccatcggccgggtcgacatgaagctggataacaatgtcttcgag
atgtccggcggcagcattatcaacaatctggtgaccgggtttggcagggacacgatcacc
ctgtcgggtggcagcatcgggggggccgtcagcgtcagcggtggcgatgaccagataacc
atcagcggtggcgaaatccgcggcggcatacgcgccagcttcggtaacgacagcttcaac
tggctcaacggtggttacgtacgcaccagtgtggcgatggccgacggcaatgacaccgcg
cgcctgtacaacctgagcgaatattttctgagcgccagttcgctgctcgatggcggcccg
ggcgatgacgtgctgaccttcgacaacacccactccgcacgcccggagcgttacgctaac
tgggaaacggtcagtctggagaacagcacgcagctggatctggccggcaagctgattctg
ggcgacagcgtcagcaataccggtgtcctgaatgtgggcgccgggagcaccctgacgtca
gtgtcgtcgggcagtgtcgttccgttcaatgcgacatcccgtgccacgctcaataacgct
ggcacgcttgacctgagtggcagtccgctgacaaacaccctgttgatcagaggcaactac
acaggccaggacgggcgactgctgctgcgctcggtgctgggcgatgaaacgtcgcctagc
gacaggctggtggtcgcgcagggtcatattggaggttcgacgtccatgaccgtcagcaac
cttggtggcccgggtgcgctgacctggggcaacgggatcgaggtggtagaggccagcgaa
ggtgcaaccagcgacagcgcggcattccggctgcaaaactcgctgtctgtgggtgcttat
cagtattacctgttcaaaggcggcgctacggcgggctccgaaaacagctggtatctgcgt
tcggcggtcatttcccctgccgagcccgccccggtcattccgccagaacccgccccggta
acgccccctgcccctgaaccggtaccagagccgaatcccgggccggagcctcaacctgaa
cctgaacctgaacctgaacctgaacctcaacccgaacctcaacccgaacctgcgccgact
cccattcccattcccattccgactccgactcctgagccaacaccaacgccggcaccaagc
ccgacacctgtgcctggccctacgccgacacccacccccatagttccgcctgccaacccg
ccaccgcagccgcccgcgctcgccctgcccgttccggccctgggcacaccgcccctgccc
gcgccggtgcccggagcgccgcccatcattctgtatcgtccggaagtcgccacttacgcc
gcagtgtcgccagcggcagcggcactggcgtcaagttcgctgggcacctttcatgagcgt
cagggcgatcagcgtctgcttacccagtcaggggtaacccccgcaggctgggcccgagtg
ttcggcagtgacgtcagacagcaatgggccggcgacgtcagcccggctctcgacgcgtca
tccaaggggtatcagatcggtcacgatctgtacgcttggcaaatggccaacgaatggagt
cagcgcgtggggctgtttgtcgcccataaccgtctggatggccgggtcaaaggctttgcc
ggcggcttcgaagagcgccgtaccggtcgtatgaaactgaccggcgacagccttggcgct
tactggacgctgatcgcccccagtggcggctacgtcgatgccgtagcgatgggcacacgc
ctggacggttacagccgctccgaccgtggcctgcgcatcgacaccgaagggcatgccctg
agcctgtctctggaaacggggtatccactgcccctgtcatcgcgctgggtggtcgagccg
caggcgcaaatcatccaccagcgcatcaggctcgacgaccagcacgatggtatttcccgc
atcgggttcgataatcagcgtcacacgacgctgcgcattggcacgcgtttcaaaggtagc
tatcagataagaaaaatgccgatcgaaccctaccttcgcgccaatctatggcgcaacgca
gacggtcatgatgcagtgactttcgatcgggtacagcagatcaggaccgagcatcggtca
acgacggccagtcttggcggggggatggcggcaaaaatgtccagcgcaacaagtctgtac
tgggaggcgaactacagccgcgacctgcacaatcacgatcggaacggtgtcagcgccagc
ctgggagccaggctggcgtggtaa
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