Pseudomonas cannabina pv. alisalensis: JGS08_13980
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Entry
JGS08_13980 CDS
T07379
Name
(GenBank) response regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_3
HisKA
PAS_4
PAS_9
ULD
OmpH
Motif
Other DBs
NCBI-ProteinID:
QQN19772
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Position
3136698..3138731
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AA seq
677 aa
AA seq
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MSIPGQLAERAIILAPRGRDNQIARRILDEAGFPAAVVHDLIELVRELAAGAGLAIIADE
ALQNGDINPLLDLLAQQPAWSDLPIVLLTHHGGPENNPSARLGNLLGNVTFLERPFHPVT
LVSLVTTAVRGRRRQYEARGRIEDLHESERSLQNALKAGRLGSWQLQAENLKLNCSAITK
AHFGRDEQEAFGYDDWLSVVYSEDQPRMQSALQRSLDSGVDFIIEYRNVWPDGSLNWVDV
RARAIRDNHGMVSSMAGVTSDITERKQAESQLRRLNETLEQQVEERTAQLRHKEEVLRQS
QKMEAVGQLTGGIAHDFNNMLTGIIGSLELIRRRVARGQVQELESLIDLGVTSANRAAAL
THRLLAFSRRQSLDSKPVHMNHLVNAMDELLRRSVNESIRLQVRLSEDLWTAEADPNQLE
NALLNLVLNARDAMSEGGGELVVETYNQHLDKSFTNAHENLLPGDYVVLSVTDTGCGMPE
AVISRAFDPFFTTKPIGQGTGLGLSMIYGFSKQSHGHVSISSEVGQGTTVQLFLPRFQGL
QNDDEQSFQSHAIHAEDGETVLIVEDDSAVRALVSEVLSELGYSFIEASDAPGAVPILES
GQRIDLLISDVGLPGMNGRQLAEIARQLRPELKVLFITGYAEHSAVRAGFLETGMQLITK
PFAFDHLTSKVREMIEA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccgggtcaactggccgagcgtgcaatcattcttgcccccagagggcgagac
aatcagattgcccggcggatactcgacgaagcgggcttcccggcagccgtagttcacgac
ctgatagaactggtcagggagctggctgccggagcgggtcttgcgatcatcgccgacgaa
gcactgcaaaatggcgatatcaacccgttgcttgatctgttggcgcaacaaccggcgtgg
tctgacttgcccatcgtgctgctcacccatcacggcggtccggaaaataatccgtccgct
cgcctgggcaatcttctcggcaacgtgacgtttctggaacgcccgttccatccggtcacg
ctggtcagcctggtgacgaccgcagtgcgtggccgcaggcggcagtatgaagcccggggg
cgaatcgaggatctgcatgaaagcgagcgcagcctgcagaacgcactgaaagccggacgt
ctcggctcgtggcaattgcaggcggaaaatctgaaactcaactgctccgccatcaccaag
gcgcattttggccgggatgagcaggaagcgttcggttatgacgactggctgtcggtggtc
tattccgaagatcagccacgcatgcaatcggcgctgcagcgcagtctcgattccggtgtc
gacttcatcatcgaataccgcaacgtgtggcctgacggctcactcaattgggtggatgtg
cgtgcccgtgcgattcgcgataaccacggcatggtcagctcgatggcgggcgtcacgtca
gacatcaccgaacgcaaacaggccgaatcccagctgcgccgcctcaacgagacccttgag
caacaagtcgaagaacgcactgctcagctgcgccataaggaagaagtactgcgccagtcg
cagaaaatggaggcggtaggtcagttgaccggcggcatcgcccacgacttcaacaatatg
ttgaccggcatcattggcagtcttgagttgatcagaagacgtgtggcgcgcggccaggtg
caggaactggaaagcctgatcgatctgggcgtgacgtccgccaaccgcgctgccgcgctc
acccatcgcttgctggcattctcgcgtcgccagtcactggactccaaaccggtgcacatg
aaccacctggtcaacgccatggacgagctgttgcgccgcagcgtcaacgagagcattcgt
ttgcaggtgcgcttgtcggaggacctgtggaccgccgaagccgaccccaaccagctggaa
aatgcgttgctcaacctggtgctcaatgcccgcgacgcgatgtccgaaggcggcggcgag
ctggtggtcgagacgtacaaccagcacctggacaaaagcttcaccaacgcccatgaaaac
ctgttgccgggcgattacgtggtgctgagcgtcactgacaccggctgcggcatgccggag
gcagtgatcagccgggcattcgatccgtttttcaccaccaaaccgattggccagggcacc
ggcctcggtttgtcgatgatctatggcttcagcaaacaatcacacggccatgtctcgatc
agcagcgaagtcggtcaaggcaccacggtgcaattgtttctgccgcgctttcaaggcttg
cagaacgatgatgagcaaagctttcagagccacgcgattcacgctgaagacggcgaaacc
gtgctgatcgtcgaagatgactcggcggttcgcgcgctggtcagtgaggtgctgagtgaa
ctgggctattccttcatcgaagcgagtgatgcgccgggggcagtgcctattctcgagtcg
gggcagcgcatcgatctgctgatcagtgacgtggggctaccgggcatgaacggccgacaa
ttggccgaaatcgcccgccagttacggcccgagctgaaggtgctgtttattaccggctat
gccgagcattccgccgtgcgggcaggctttctcgaaaccggtatgcaattgatcaccaag
ccattcgcttttgaccacctgacctcgaaagtcagggaaatgatcgaagcctga
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