Pseudomonas cannabina pv. alisalensis: JGS08_14125
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Entry
JGS08_14125 CDS
T07379
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_14125 (nhaR)
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JGS08_14125 (nhaR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
I-HmuI_NUMOD-like
Motif
Other DBs
NCBI-ProteinID:
QQN19797
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All DBs
Position
3170813..3171715
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AA seq
300 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTAQTVSGQISLLEASLGVDLFQRVGRQLEMTE
AGRMALPYAEQMFQLGNELENLLRSQPDEQQLLFRIGVADVVPKSIVYRLISPTMNLQES
IRITCREDKLERLLAELAVQRLDLVISDSPMPPHLDIKGHSHKLGECGISFFATREVAER
VGADFPQCLHGAPLLIPGPETVVRGRLTRWFAELKIQPRIIGEFDDSALMKAFGKSGSGI
FVAPSVIADEVQSQYDVQLIGQTDAVTESFYAITVERKVRHPGVVAIAESARNQLFTDAG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactatcggcagctgcattacttctgggtcgtggccaaaaccggcagtatcgtg
cgtgcgtgcgagcagctgaacctcacggcccagaccgtcagcggacagatcagcctgctg
gaggcctcgctgggcgtcgatctgtttcagcgcgtagggcgacaactggaaatgaccgaa
gccggtcgcatggccctgccctacgccgagcagatgtttcaactgggcaacgagctggaa
aacctgctgcgttcgcagccggacgaacaacagttgctgttccgtatcggcgtggcggat
gtggtgcccaaatcaattgtgtatcgattgatttcaccgaccatgaatctacaggaatcc
atccggattacctgtcgcgaggacaagctggaacggttgctggcagagctggcagtgcag
cgtctggacctggtgatctcggacagcccgatgccgccgcatctggatatcaaaggtcat
agccacaaactgggcgaatgcgggatcagttttttcgccacgcgcgaagtggccgaacgc
gtcggggcagatttcccgcagtgtctgcacggcgcgccactgttgattccggggccggaa
accgtggtgcgcggtagactgacgcgttggtttgccgagctgaaaatccagccgcgcatc
atcggcgagttcgacgacagcgccctgatgaaagcattcgggaaatcaggcagcggcatt
ttcgtagcacccagcgtgatcgccgatgaagtgcagagccagtatgacgtgcagctcatc
ggccagacggacgcggtgaccgaatcgttctacgccattaccgtcgagcgcaaggttcgg
caccccggcgtagtggccatcgccgaaagcgcccgaaaccagttatttaccgacgcgggc
tag
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