Pseudomonas cannabina pv. alisalensis: JGS08_14205
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Entry
JGS08_14205 CDS
T07379
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcab03000
]
JGS08_14205
Transcription factors [BR:
pcab03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JGS08_14205
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
TrmB
Fe_dep_repress
HTH_CodY
HTH_27
GMT-wHTH
DUF6880
HTH_11
HTH_5
HTH_36
HTH_41
ATPase
MarR
Ribosomal_S25
HTH_29
HTH_28
HTH_20
HTH_23
EAP30
TFIIE_alpha
HTH_54
BLACT_WH
Motif
Other DBs
NCBI-ProteinID:
QQN19812
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Position
3185632..3186384
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AA seq
250 aa
AA seq
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MKRLPLDDNFKVNRNPITLREIVLDKLRSAIMNFQLLPGDRLVERDLCDRLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDACDIYELRCVLEGLIVQLFTLRAKPKDIRALE
KALEENRQSLKEGELQQVIDSVQGFYDVLLEGSGNQVAATQLRQLQARISYLRATSVSQE
NRRDASNKEMELIVEAIKSGDPLAAHQASVDHVRNAARVALEYLKSKQDDDAKVRDIVAP
VALKEPRIGR
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgccactcgacgacaacttcaaggtcaatcgcaatccgatcacactgcgg
gagatcgtgctggacaaactgcgcagcgcgatcatgaatttccagttgctgccgggggac
cgtctggtcgagcgggacctgtgtgatcgtctgggagtcagccgcacctcggtacgcgag
gcgctgcgccatctggaatccgaaggcctggtcgagtttgccgatgccaaaggtccacgc
gtcgccatcattaccctcgaagatgcctgcgatatctacgaactgcgctgcgtgctggag
ggcctgatcgtccagctgttcaccctgcgcgccaaacccaaggatattcgagcgctggag
aaggcgctggaagagaatcgccagtcgctcaaggaaggcgagttgcagcaggtgatcgac
tcggtacagggcttctatgacgtgctgctggaaggttcgggcaatcaggttgccgccact
cagctgcgccagttgcaggcgcgcatcagttacctgcgggcgacctcggtttctcaggaa
aaccgtcgcgacgccagcaacaaggaaatggaactgatcgtcgaagcgatcaaaagcggc
gacccgctggcggcgcatcaggcctcggtcgatcacgtgcgcaacgctgcgcgggtggcg
ctggaatacctgaaatccaagcaggatgacgacgcaaaagtccgcgatatcgttgcgcct
gtggccctcaaagaaccccgcataggtcgatga
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