Pseudomonas cannabina pv. alisalensis: JGS08_14535
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Entry
JGS08_14535 CDS
T07379
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JGS08_14535 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcab02044
]
JGS08_14535 (tssK)
Secretion system [BR:
pcab02044
]
Type VI secretion system
Imp/Vas secretion system core components
JGS08_14535 (tssK)
SSDB
Ortholog
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GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QQN19871
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Position
complement(3260007..3261338)
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AA seq
443 aa
AA seq
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MNSHKVIWQEGMLLRPQHFQHNDRYYDHQLRVRTQLAGPYNWGFTALEIDPQFLSSGQIV
LAQASGILPDGSIFDIRDRDRPLALDIPANTSSMSVYVALPIVAGNCIEARSQEQADVVA
RFSAYTVSILDSNAGEESATPVFCARPEFRLLLGEPGGEHAYAMLKLCHVLSCSPDKAIT
LDTDFSPTFISAGGSRYLMSCLKEVVSLLRHRGDVIAERIGAQGQASGAQVGDFMMLQLI
NRSAPLLQHYLNIRHVHPEKLYRVLLCLLGELSTFADNSRRPRLDGDYQHSDQGATFLNV
MLAIRQMLSMVLEQHAQELELQVRQYGVLVSPRVDRELLGAASFVLAARAQCDAEELRLR
LPSHLKVGSVESIRELVALHLPGIRLRPLPVAPRQIPFHAGKTYFILDMDEHEQAEINKS
GGFAFHVSGEFSGLELQFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacacaaggttatctggcaggaaggcatgctgctgcgtccgcagcactttcag
cacaatgatcgttattacgaccatcaactaagagtgcgtacacaactcgcagggccatat
aactggggttttaccgcgctggaaattgatccgcagtttctgagttcgggacagatcgtg
cttgctcaggcttcgggcattttgccggatggcagcatcttcgacatacgcgaccgtgac
aggccgctggcgctggatattcctgccaatacttcaagcatgtcagtgtacgttgcgttg
ccgatcgtggctggcaactgcattgaggcgcgcagtcaggagcaggctgatgtcgtggcg
cgtttcagcgcttataccgtcagcattctggactcaaatgcgggggaagaaagtgccacg
ccggtcttttgtgcgcgtccggaatttcgcttgctgctcggtgaacccggtggcgagcac
gcttacgcgatgctcaagttgtgccatgttttgagttgcagcccggacaaggcaataacg
ctggacacggatttttcccccacattcatcagcgcgggcggttctcgctacctgatgtcc
tgcctcaaagaggtggtcagcctgcttcgccatcgaggggacgtaatagccgaacgtatc
ggtgcgcagggtcaggcaagcggggcgcaagtaggcgacttcatgatgctgcaattgatc
aatcgcagcgcgccgctgcttcagcactacctcaatatcaggcatgtccaccccgaaaaa
ctgtacagggtcttgctgtgcttgttgggtgaattgtcgacatttgccgataacagcaga
cgaccccggcttgacggcgactaccagcacagtgaccagggtgcgacgttcctcaacgtc
atgctcgccattcgacagatgctgtccatggtgcttgagcagcatgcccaggaactcgag
ctgcaagtcagacagtatggcgttctggtttccccgcgggttgaccgcgagctgttgggt
gccgcctcgtttgtgcttgcagcccgcgcgcagtgcgatgcggaagagctacgcctgcgg
ctgccttcgcacctcaaggtcgggtctgtggaaagtatccgcgagctggttgcactgcat
ctgccggggatccgcttgaggcccttgccggtagcaccacggcagattccgtttcatgcc
ggcaagacctatttcattctcgacatggatgagcacgagcaagccgaaatcaataaatcc
ggagggtttgccttccacgtctcaggcgagttttccgggcttgaattgcagttttgggcg
atcagaaattga
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