Pseudomonas cannabina pv. alisalensis: JGS08_14835
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Entry
JGS08_14835 CDS
T07379
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_14835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_14835
Transporters [BR:
pcab02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JGS08_14835
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Paralog
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Motif
Pfam:
BPD_transp_1
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QQN19925
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Position
3319060..3319854
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AA seq
264 aa
AA seq
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MSRNGPLALSFHALVVIFMMAPLVVVCLVAFTPENTLSLPTTDFSLRWFKAVFERADFID
SFYNSLVLAFISATLATLIAVPAALAITRHTFPGRNFFNALFLSPIIIPHLVLGVAMLRL
FALMGVNGSFTWLTFAHVLVITPYVLRLVLAAAIGIDRSAEHAAESLGASRFTLFRQITL
PMILPGVAGGWLLAFINSFDEVTLSIFVTSPATQTLPVRMYVYATESIDPMMAAVSALVI
ALTAITMILLDRVYGLDRVLVGKH
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaacggtccgttggccctgtcgtttcacgcattggtggtgattttcatgatg
gccccgctggtggtggtgtgcctggtggcctttaccccggaaaacaccctgagcctgccc
accactgacttttcgttacgctggttcaaggcggtgttcgaacgcgccgacttcatcgac
tcgttctacaacagcctggtgctggcgttcatctcggcgaccctcgcgacgctgatcgca
gtcccggccgccctggcaatcacccgacacacattcccgggccgcaactttttcaacgcg
ctgtttctctcgccgatcatcattccgcatctggtgctgggcgtggcgatgctgcgcctg
tttgcactgatgggggtgaacggcagctttacctggctgactttcgcccatgtgctggtg
attactccttatgtgctgcgtctggtgctggctgcggccatcggtatcgaccgcagcgcc
gagcacgccgccgagtcattgggcgcaagccgtttcacgctgtttcgccagatcactctg
ccgatgatcctgcccggcgttgcaggcggctggctgctggccttcatcaacagtttcgac
gaggtcacgctgtcgatcttcgtcacctcgcctgccacccagaccctgccggtacgcatg
tacgtctacgccaccgaatccatcgacccgatgatggccgccgtatcggcgctggtcatc
gccctgaccgccatcaccatgatcctgcttgaccgggtctacgggctggatcgcgtgctg
gtcggcaaacattaa
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