Pseudomonas cannabina pv. alisalensis: JGS08_14935
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Entry
JGS08_14935 CDS
T07379
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
Motif
Other DBs
NCBI-ProteinID:
QQN19942
LinkDB
All DBs
Position
complement(3339234..3342065)
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AA seq
943 aa
AA seq
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MSTLYFKDLSMTVSFLRKAAVGITCTWLAFSAHASTISRTYTSLGQVARIDGARTDVDDI
TRYEYDAQGNLTTVTNALDQVYALASFDSYGNPQRVTDPNGVVTTLTYTPQGWLASLTVD
LSTTQYAYNEVGDLLQVTTADGNWVKYSYDDARRLVGVRNRLGESINYTLDPMDNRTAER
TKDANGAVVHLQRRVFDELGRLIRVVGAGDQTQHYGYDLNDNQSSDTTPRNHKTQQAFDA
LNRVSKIVDPLQGVTALGYNSDDKVTKVVDPRGVTTLYTYDSLGNRISSKSPDGGTSTYA
YDEANNLIRSTDARGVVTEYAYDALNRLTSKSYPATPALNIKFLYDQTADGNLGIGRLTG
LQDSAGVLTYAYDAKGNLVRQYRSVGVNSGDYYETLNYGYDAARNLVQIGYPSSINLTYT
RNSAAQVTGVKLAIGNKTATLASNISYQPFGPVNSLTWGNGILLSRTYDQDYQLTQQQVG
NWQTTYRYDADSNIAETATSLWGAVQYEYDALGRLTQEQTNSLKKAYSFDATGNRTQRTT
TSLTTSDATETQSLTYASDSNRLTGVNGSALPVDAAGNHTQINGRRFTYDSQGRLSEVYQ
ANIYKIADYKYNALGQRIIKRAYVMGSQTLAGTTTYLYDPSGKLIGQTFYDGNGQKTSGQ
YWFWLDNMPLAQLTANFSTLGEVSSSKLIYLHVDHLNTPRLATDSTQALLWRWNSDAYGV
GAPEEDVDGDGKATIIALRFPGQIYDAQTQLSYNYYRDYNPDTGRYVQSDPIGLGGGLNT
YAYVNANPLAYSDPYGLASITISSWGGLSDLVPQIGRLGVGVATGLGVGASCLVYSSSLG
DGECPPGGCYYSNETSESPVPDAIPGDRTRGPSDIWVKPDGDMDTANSDFDNLNPSDVRD
IPGGRVGKLSDGKTVVVRPGSSDGRPTLEIQSGRDRVKVRYGK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcactctttatttcaaggacctgagcatgaccgtttctttcttgcgtaaggccgcg
gtgggtattacctgcacctggctggcattttcggcgcacgcaagcactatcagccgcacc
tatacgtccctcgggcaggttgcaagaattgatggcgcacgtactgatgttgatgacatc
acccggtacgaatacgacgcgcaaggcaacctgactactgtgactaacgcgctagatcag
gtatatgcgcttgccagtttcgacagttacggcaacccacaaagagttaccgaccctaat
ggggtagtgacgacgctcacctacaccccgcaaggctggcttgccagtctgactgtcgat
ttgtcgacgactcagtatgcctacaacgaagtcggcgacctgctacaagtcaccactgcg
gatggcaactgggtcaagtacagctatgacgatgcccgccgccttgtcggcgtgcgtaat
cggcttggcgaaagtattaactatacgctcgacccaatggataaccgcacggcagagcgg
accaaagacgccaatggggcagtcgttcatcttcagcgacgggtgtttgatgaattgggt
cgcctgatacgggtagtgggtgctggcgatcagactcagcattatggctatgatctgaac
gacaaccagtcaagtgacaccacgccgcgtaatcacaaaacgcagcaggcgttcgatgct
ctgaatcgagtcagcaagatcgtcgatcctttgcagggcgtgactgccttgggttacaac
tcggatgacaaggtcaccaaagtggttgacccgcgtggcgtgacgacgctgtacacctac
gacagtctaggcaaccggatcagcagcaaaagccctgatggcgggaccagcacttacgcc
tacgacgaggccaacaatctcattcgcagcacagacgcacgcggtgtcgtgaccgagtat
gcctacgacgcgctcaatcgccttaccagcaagagctatccagccacacctgcgctcaat
atcaagtttctctacgaccagactgctgatggtaatctcggaattggacgcctcacaggg
ctacaggacagcgctggtgttctgacgtatgcctatgacgccaaaggtaacttggtcagg
caataccgctcagtgggtgtcaacagcggtgactattatgaaacgctgaattacggttat
gacgccgcccgcaatctggtgcagattggctatccatcaagtatcaacctgacctacacg
cgcaacagcgcggcacaggtaacgggcgtcaaactggccattggcaacaagacagcgacg
ctggccagcaacatctcctaccagccattcggcccagtcaattcgctaacctggggcaac
ggtatcctgctgtcgagaacctatgaccaggattatcaactgacccagcagcaggtcggt
aactggcagacgacttatcgctatgacgctgacagcaacattgccgagacggccaccagc
ctctggggtgcggtccagtatgaatatgatgcgctgggccgtttgacgcaggagcaaacc
aacagtctcaaaaaggcttacagcttcgacgcgacaggcaacaggactcagcgtacgacc
accagtctgaccaccagcgatgctactgagacccagtcgttaacctatgctagcgacagc
aaccggctgaccggtgtcaatggctccgcactgccagtggacgctgcgggtaatcacact
caaatcaatggccgccgtttcacctacgacagccaaggtcgcctgagcgaggtctatcag
gcaaacatctacaaaattgccgattacaaatacaacgcgctgggccagcgaatcatcaaa
cgtgcctacgtgatgggaagccagacgctggccggcacaactacttacctctacgatcca
agcggcaagctgatcggccagacgttctatgacggaaacggccagaaaaccagtggtcaa
tactggttttggctagacaacatgccactggcccaactgacggctaacttctccacgctg
ggcgaagtcagcagtagcaaattgatctacctgcatgttgatcacctgaatacaccgaga
ctggcgacagacagcacccaagcactcctgtggcgttggaacagtgatgcgtatggagtg
ggggcacctgaagaggatgtggacggcgacggcaaggccacgatcatcgcgctgcggttt
ccaggacagatttacgatgcccaaacgcagctgagctataactattatcgagactacaat
ccggataccgggcggtatgtgcagagtgatccgattgggttggggggcgggctcaataca
tatgcttatgttaacgccaatccgttagcctacagcgatccctacggattagcttcgata
acgatatcgtcgtggggagggctttctgatctcgtaccgcagatcggaaggttaggtgtc
ggggttgctacaggcttgggggtaggggcgtcatgtcttgtttactcatcatctcttgga
gacggggaatgtccaccgggaggctgctattacagcaatgagactagcgaaagtcctgtc
ccggatgcgattcctggtgataggactcgtggtcccagtgacatatgggttaaaccagat
ggtgatatggatactgcaaactctgactttgataatctaaatccttcggatgtaagagac
attcctggcgggcgtgtaggtaaactctcggatggcaaaaccgtggtcgtgagacccggg
agttcagatggtcgacctacattggagattcaaagtggacgtgatcgagtaaaggtgcgt
tatggaaagtag
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