KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_15125
Entry
JGS08_15125       CDS       T07379                                 
Name
(GenBank) TetR/AcrR family transcriptional regulator
  KO
K18294  TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Module
pcab_M00639  Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcab03000]
    JGS08_15125
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:pcab01504]
    JGS08_15125
Transcription factors [BR:pcab03000]
 Prokaryotic type
  Helix-turn-helix
   TetR/AcrR family
    JGS08_15125
Antimicrobial resistance genes [BR:pcab01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexCD-OprJ [MD:M00639]
    JGS08_15125
SSDB
Motif
Pfam: TetR_N LacI HTH_Tnp_ISL3 Xre-like-HTH HTH_6 TetR_C_29 DUF134 HTH_31 HTH_IclR DUF6066 HTH_26 TrmB
Other DBs
NCBI-ProteinID: QQN19974
LinkDB
Position
complement(3385184..3385741)
AA seq 185 aa
MDVPAADEKFLKALAVALVDHSNGTFKDIAEAAGVSKATLNRFCGTRANLIEMLLIHASE
LMNKMIADADLQNAPPLEALQRLVENHLTHREMLVFLVFQWRPDTMDESCGGLRWLPYSD
ALDAFFLRGQREGLFRIDISAPVLTETFASLLFGLVDAERRGRVARTGMDTVLLQMFMQG
ATSVK
NT seq 558 nt   +upstreamnt  +downstreamnt
atggacgtacctgctgctgacgaaaaattcctgaaagcgctggccgtggcgctggtcgac
cattccaacgggacattcaaagacattgccgaagcggcgggcgtgagtaaagccacgctc
aatcgcttctgcggcacccgcgccaacctgatcgaaatgctgttgatccatgcgtccgag
ctgatgaacaaaatgattgccgacgccgatctacagaacgcgccaccgcttgaggcgttg
cagcgtctggtcgaaaaccacctgacccatcgggaaatgctcgtctttctggtttttcag
tggcgcccggacaccatggacgaaagctgcggcggcctgcgctggttgccgtattccgac
gcgctggatgcattctttctgcgcggccagcgcgaaggcctgttccgcatcgacatcagc
gccccggtgctgaccgaaaccttcgcttcactgctgttcggcctggtcgacgcagagcgc
cgcggccgggttgcgcgcacgggaatggataccgtgttgctgcagatgttcatgcaaggc
gcgacgtccgttaagtga

DBGET integrated database retrieval system